Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0838 ATGGAGAATTTTGCAAAGGATGCATCTTCACACAGCATCAATTCTATAAAGTACTTGGTACCTGAAAATCAACCTCATCGTACTTGTTACCATTTTCAGCCACCACATAATTGGATGAACGGACCCATGTATTACAAAGGAGTTTACCACTTTTTCTATCAACATAACCCATTTGGACCAACCTTTGGTAAAATAATGGTATGGGCTCATTCTGTATCATATGATCTCATCAATTGGATTCATCTGAAACATGCTCTTGAACCAAGTGAGCCCTATGACATTAATGGCTGCTATTCTGGCTCAGTTACAATCCTCTCTGAGGAAAAGCCTGCTATTTTATATACAGGGAATGATAACAACAAGAACCAAGTTCAAAACTTAGCCATGCCAAAAAATCTATCAGACCCTTACCTAAGGGAATGGGTCAAACACTCTCAAAACCCTGTCATGGTTGCACCTAGTGGAATTGAAATGGATAATTTTAGAGACCCAACAACAGCTTGGAAGGGAAATGATGGTAAATGGAGAGTAATAATTGGTGCTAAAAATGGTGATGATGGAAAAGTTATTCTATGCCATAGTGAAGATTTTGTACATTGGATATTAGACCCTATTCCTTTTTATGCAATAGATAATTATGGAATGTGTGAATGTCCAGATTTTTTTCCTGTGTCCATTTGTGGTACAAATGGGGTTGATACATCAGTTCAAAATTCAAGTATTAGGCATGTTTTGAAGTTGAGCTATCAAAATGAACAACAAGAGCATTATTTTCTAGGCAAATATCAACCTGATCAGGAAAATTTTATGACTGATACTAAATTTACAGGAACTAGTTTGGACTTAAAATTGGACTATGGAGCATTTTATGCTTCCAAGACATTTTTTGACTATGCTAAGAAGAGGAGAATATTGTGGGGATGGGTACAAGAATCTGACACCACAAAAGATGACATTGAGAAAGGATGGGCTGGTTTACAGTCGATTCCAAGGCAAGTTTGGCTTGACAAAAGTGGGAAGCAATTGATGCAGTGGCCAATTGAAGAGGTTGAAAAATTACGTGACAAGCAAGTCAGTATTCTAGGAAAGAAACTAATTGGTGGATCAACTCTTCAAGTATCAGGTATCACTGCATCACAGGTGGATGTAGAAGTGTTGTTTGAGCTACCAGAACTAGAAAGTGCAGAGTGGTTAGATGGCAATGAAGTTGATCCTGAACTACTTTGTAGTGAAGAATATGCATCAAAAAGTGGCACAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCAGAGGATCTCACAGAGAAGACTGCAATATTCTTCCGCATATATAGAACTCCAAATGGATATAAATGCCTCATGTGTAGTGATGAGAGCAGGTCTTCATTGCGGCAAGACCTTAATAAAAGGACATATGCAACTACCTTTGACATTGATCCCAATATCAAAACCATTTCACTTCGAAGCTTGATTGATCGCTCCATTATTGAGAGCTTTGGAGAGGAAGGTAGGGTTTGCCTCACCAATAGAGTTTATCCATCGTTGGCTATAGACAAAGATGCACATCTTTATGTATTTAACAATGGAACCCAAACTGTGTTTATCTCAAAACTAAATGCTTGGAGCATGAAGCATGCAGAGTTTGGCTATGAGGAAAAAATAGAAAATATAAATAGTTAA 1680 0.3756 MENFAKDASSHSINSIKYLVPENQPHRTCYHFQPPHNWMNGPMYYKGVYHFFYQHNPFGPTFGKIMVWAHSVSYDLINWIHLKHALEPSEPYDINGCYSGSVTILSEEKPAILYTGNDNNKNQVQNLAMPKNLSDPYLREWVKHSQNPVMVAPSGIEMDNFRDPTTAWKGNDGKWRVIIGAKNGDDGKVILCHSEDFVHWILDPIPFYAIDNYGMCECPDFFPVSICGTNGVDTSVQNSSIRHVLKLSYQNEQQEHYFLGKYQPDQENFMTDTKFTGTSLDLKLDYGAFYASKTFFDYAKKRRILWGWVQESDTTKDDIEKGWAGLQSIPRQVWLDKSGKQLMQWPIEEVEKLRDKQVSILGKKLIGGSTLQVSGITASQVDVEVLFELPELESAEWLDGNEVDPELLCSEEYASKSGTIGPFGLLALASEDLTEKTAIFFRIYRTPNGYKCLMCSDESRSSLRQDLNKRTYATTFDIDPNIKTISLRSLIDRSIIESFGEEGRVCLTNRVYPSLAIDKDAHLYVFNNGTQTVFISKLNAWSMKHAEFGYEEKIENINS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0838 559 Gene3D - 359 543 - -
Lal8g0838 559 CDD GH32_Fruct1-like 37 335 - -
Lal8g0838 559 Pfam Glycosyl hydrolases family 32 N-terminal domain 31 346 IPR013148 -
Lal8g0838 559 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 21 551 - -
Lal8g0838 559 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 21 551 - -
Lal8g0838 559 Pfam Glycosyl hydrolases family 32 C terminal 349 542 IPR013189 -
Lal8g0838 559 Gene3D Glycosyl hydrolase domain; family 43 36 358 IPR023296 -
Lal8g0838 559 SMART glyco_32 31 503 IPR001362 GO:0004553|GO:0005975
Lal8g0838 559 SUPERFAMILY Arabinanase/levansucrase/invertase 22 347 IPR023296 -
Lal8g0838 559 SUPERFAMILY Concanavalin A-like lectins/glucanases 346 545 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0838 Lal-Chr8 6086800 6091969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0838 43 548 Glycoside Hydrolase AT5G11920 55.664 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0838 - K01193 gmx:100806220 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0838 8 6086800 6091969 Lal8g0838 8 6086800 6091969 ECH
Lal8g0838 8 6086800 6091969 Lal25g0629 25 4842437 4846257 LSH