Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0827 ATGATCGCTTACATAGAACACTTCGTGCACGGAAACGACACCGAATCTAAGCCAGACGACGACGTTTCAGGTCTCCCAGCCAATTTCGATTTGGGTGCCACTGGAGTAGCCAGTAAAGACTTCGGCGGCATGAAATCCTTAAAACCCTTGGCCCTCATCATGCCCACCACCACCGTCGACGTCTCTCAGGCGGTGAAATCAGCGGCGCGAACCTCTCACCTCACGGTGGCAGCCCGAGGCAACGGTCACTCAATCAACGGCCAGGCCATGGCGGACAAAGGTTTGGTCCTTGGCATGCGCGCCATGGAGGACCATTATTTCGAACTCCTATGGCTTGATGGTACCCCATACGTCGACGTTTCAGGAGGGGCATTATGGGAAGACGTGCTAAAACGCTGCGTTTTGCAGTTTGGGCTATCTCCGAGGTCGTGGACTGATTACCTTAGTTTAACGGTTGGAGGAACGCTTTCTAACGCCGGCGTTAGTGGCCAGGCTTTCCGTTACGGCCCGCAAACGTCCAACGTGTCGGAATTGGAAGTCGTTAACGGTAAAGGTGATATCTTGGTTTGTAACGAAACACAAAATTCAGAGCTTTTCTTTGCCACGCTTGGTGGTCTTGGCCAATTCGGTATCATCACTAGAGCCAGGGTCATGCTCCAACAAGCTCCAGATATGGTGAGATGGATAAGGGTGGTTTACTCAGAATTTGAGGACTACATTAAGGACGCAGAGTGGCTAGTAACTCTGGGAGAAGAGGATGGTTCTGATTACGTGGAAGGGTTTGTTTTTGTTAACAGTGATGACCCTTGCAACGGATGGTCCACGGTGCCAATGGATCCATCAAACCAACGGTTCGACCCGGTTCATGTCCCTTCAACCTCTGGTCCGGTTCTATATTGCTTGGAATTTGTCCGTCACTACCGTCACACGGACCACCCTTCCCATGTTGATATGGTAGTTGATAGATTAGTTGGAGAGCTAGGATTCGTTGAGGGTCTAAAGTTTGAAGTGGACGTGACATACATGGAGTTTTTGCTACGTGTAAATCGTGCGGAAGAGGAGGCAAGATCTAATGGAACTTGGGATGCACCTCATCCTTGGTTGAACATGTTCGTGTCTAAGTCCTGCATCGTTGATTTTGATCGTGAAGTGTTCAAAAAGATCCTTAAGCAAGGTGTTGGTGGCCCCATTTTAGTGTACCCACTCCTAAGAAACAAGTGGGACAGTCGTCACTCGGTAGTGGTACCAGACAGTAACATCTTCTACATAGTAGCATTGCTCCGATTTATTCCTCCACCACCAAAGGGACCACCTACGGAACTGTTAGTAGCACAAAACCATGCAATTATTCAGTTATGCTACAATAAAGGTTTTGATTTTAAGTTATATCTTCCTCACTATCAGTCACAAGAGAAATGGATGCGACATTATGGAGATAAGTGGTCCAGATTTGTTGAGAGAAAAGCCATTTTTGATCCCTTGGCTATTCTTGCTCCTGGACAGAGGATTTTTTCTAGAATCTCTCAATCTTTGTCTATTACATAA 1545 0.4751 MIAYIEHFVHGNDTESKPDDDVSGLPANFDLGATGVASKDFGGMKSLKPLALIMPTTTVDVSQAVKSAARTSHLTVAARGNGHSINGQAMADKGLVLGMRAMEDHYFELLWLDGTPYVDVSGGALWEDVLKRCVLQFGLSPRSWTDYLSLTVGGTLSNAGVSGQAFRYGPQTSNVSELEVVNGKGDILVCNETQNSELFFATLGGLGQFGIITRARVMLQQAPDMVRWIRVVYSEFEDYIKDAEWLVTLGEEDGSDYVEGFVFVNSDDPCNGWSTVPMDPSNQRFDPVHVPSTSGPVLYCLEFVRHYRHTDHPSHVDMVVDRLVGELGFVEGLKFEVDVTYMEFLLRVNRAEEEARSNGTWDAPHPWLNMFVSKSCIVDFDREVFKKILKQGVGGPILVYPLLRNKWDSRHSVVVPDSNIFYIVALLRFIPPPPKGPPTELLVAQNHAIIQLCYNKGFDFKLYLPHYQSQEKWMRHYGDKWSRFVERKAIFDPLAILAPGQRIFSRISQSLSIT 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0827 514 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 222 IPR016166 GO:0071949
Lal8g0827 514 SUPERFAMILY FAD-binding/transporter-associated domain-like 33 219 IPR036318 GO:0050660
Lal8g0827 514 PANTHER GULONOLACTONE OXIDASE 31 509 - -
Lal8g0827 514 SUPERFAMILY FAD-linked oxidases, C-terminal domain 223 504 IPR016164 GO:0003824|GO:0050660
Lal8g0827 514 Gene3D - 99 224 IPR016169 -
Lal8g0827 514 Pfam FAD binding domain 49 190 IPR006094 GO:0050660
Lal8g0827 514 Gene3D - 226 463 IPR016170 -
Lal8g0827 514 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 223 504 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lal8g0827 514 Gene3D - 37 505 IPR016167 -
Lal8g0827 514 PANTHER CYTOKININ DEHYDROGENASE 7 31 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0827 Lal-Chr8 5947133 5954866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0827 K00279 - gmx:100816566 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0827 8 5947133 5954866 Lal10g0725 10 14988579 14994868 LSH