Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0719 ATGGAACGTGCACGTAGGGTTGCAAACAGTGCCATTCTGAAGCGTCTTGTTTCAGAGGCAAAACAACACTGCAAAAATGAATCTTTATTCAACTCATCAACCACCCCTGTTTTATACTCTGTTTCTTCTTCTTCTTATTCCCCTGTTTTCAGATGCAGGGGATCCATACCCAACAACTTTCTAAACAAAAACAACATCAACAAATCACAAAATGTTATTGGTTTTCAATCACAAACTCGATCTATATCTGTTGAATCACTCAAACCAAGTGATACATTCCCTCGGCGCCATAACTCTGCCACCCCACAAGAACAAACCAAGATGGCTAATTCATGTGGCTTCGACACTATTGATTCTCTCATTGATGCAACTGTGCCAAAATCCATTCGTTTGAATGAAATGAAGTTTGGAAAATTTGATGAAGGGTTAACTGAAGGTGAAATGATTCAGCACATGCAGTACTTAGCTTCAAAAAACAAGATTTTTAAGTCCTTCATTGGCATGGGTTATTACAACACTTTTGTTCCACCAGTTATATTGAGGAACATTATGGAGAACCCTGCTTGGTACACACAGTATACACCTTATCAGGCTGAGATATCACAAGGGAGACTGGAATCATTGCTGAATTTTCAAACCATGATCACTGATCTCACTGGTTTGCCTATGTCAAATGCTTCATTGCTTGATGAAGGAACCGCTGCGGCCGAAGCAATGTCCATGTGTAACAATATTCAAAAGGGTAAGAAGAAAACCTTTATTATAGCTAGTAATTGCCATCCACAGACTATTGATATTTGCGTGACGAGGGCGTCTGGTTTCGATCTTAAGGTTGTAATTGCTGATCTTAAGGATGTTGATTATAAATCTGGTGATGTTTGTGGTGTGCTTGTTCAGTATCCTGGTACTGAGGGTGAGGTTTTGGACTATGGAGAGTTTATTAAGAAGGCTCATGATAATGGAGTTAAGGTTGTTATGGCAAGTGATCTTTTGGCTTTGACTGTGTTGAAGCCTCCCGGTGAGTTTGGGGCTGATATTGTTGTTGGTTCTGCTCAGAGATTTGGTGTTCCAATGGGTTATGGAGGCCCTCATGCTGCTTTCTTGGCTACATCTCAAGAGTATAAGAGGATGATGCCTGGGAGAATCATTGGTGTTAGTGTTGACTCTTCTGGAAAACCAGCTTTGAGAATGGCAATGCAAACTAGGGAGCAACATATTAGAAGGGACAAGGCTACCAGCAACATTTGTACTGCTCAGGCACTTCTTGCAAACATGGCTGCTATGTATGCTGTATATCACGGACCCGAAGGCCTTAAAACCATTGGTCAGCGTGTTCATGGTCTTGCTAGTGTGTTTGCTCTGGGCTTAAAGAAGCTTGGAACAGTGGAAGTTCAGGATCTTCCCTTCTTTGACACTGTGAAGGTCAAGGTTGCCCATACCAGTGCAATTGCTGATGAGGCGTATAAAAGTGAAATAAATTTGCGAACTATAAATGGAAACACCATCACTGTTGCTTTCGATGAAACGACCACATTGGAGGATGTTGATAAGCTATTCAAAGTATTTGCTGGTGGCAAGCCCGTTTCCTTCACAGCTGCATCACTTGCACCTGAAGTTCAGACTTCAATTCCTTCTGGATTAATTAGGGAGAGCCCTTATCTAACACACCCTATCTTTAACACGTACCACACTGAGCATGAGTTGCTCAGATACATTCATAGGCTAGAATCAAAGGATCTCTCGTTATGCCACAGTATGATCCCACTCGGATCTTGTACGATGAAGCTCAATGCAACAACTGAAATGATGCCTGTGACATGGCCCAGCTTTACAGATATTCACCCTTTTGCACCAACTGAACAGGCTCAAGGTTATCAGGAAATGTTCAGCAATTTGGGTGAACTGTTGTGTAGCATCACCGGTTTTGACTCCTTCTCTTTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTGATGCTAATCATAGATAAACTCAAATGTGCAAGAGGAGACAACCACCGAAATGTTTGCATTATACCTGTCTCGGCACATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTAACTATTGGAACAGATGCCAAGGGAAACATTAATATTGAAGAGTTGAGAAAGGCTGCTGAAACAAACAAGGACAACTTATCCGCCCTTATGGTAACATATCCTTCAACCCACGGTGTTTATGAAGAAGGAATTGATGTGATTTGCAAGATTATTCATGATAATGGTGGCCAAGTATATATGGATGGTGCCAACATGAATGCACAGGTAGGACTTACTAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCATAAGACATTCTGCATTCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCTTTTTTACCTTCACACCCTGTGGTACCCACTGGTGGAATTCCTGCCCCCGACAAGTCTCTACCACTTGGTACCATCTCTGCTGCACCTTGGGGCTCGGCACTCATATTGCCGATCTCTTACACTTACATAGCAATGATGGGTTCTAAAGGACTCACCGATGCATCAAAGACGGCTATTCTGAATGCAAACTACATGGCAAAAAGATTGGAGAATTATTACCCCGTTCTTTTCCGCGGAGTCAATGGAACATGTGCTCATGAATTCATTATTGACTTAAGAGGCTTTAAGAACACTGCTGGGATAGAGCCAGAAGATGTTGCAAAGCGCCTCATTGACTACGGTTTTCATGGACCAACAATGTCATGGCCTGTGCCAGGCACACTCATGATTGAGCCTACTGAAAGTGAAAGCAAGGCCGAGTTAGACAGATTTTGTGATGCTCTCATTTCCATTAGAGAAGAAGTTGCTGAGATTGAGAAAGGAAAAGCTGACATTAACAACAACGTACTTAAGGGAGCACCTCATCCACCATCACTACTCATGGGAGATGCATGGACAAAACCATACTCCCGGGAATATGCAGCCTTCCCAGCTTCCTGGCTTCGCGTTGCGAAATTCTGGCCTACCACAGGACGTGTTGATAATGTTTATGGAGACCGCAACCTCATTTGCACACTTCAACCAGCCTCACAAGTTGTTGAAGAACAAGCTGCTGCACAAGCCTAG 3165 0.4316 MERARRVANSAILKRLVSEAKQHCKNESLFNSSTTPVLYSVSSSSYSPVFRCRGSIPNNFLNKNNINKSQNVIGFQSQTRSISVESLKPSDTFPRRHNSATPQEQTKMANSCGFDTIDSLIDATVPKSIRLNEMKFGKFDEGLTEGEMIQHMQYLASKNKIFKSFIGMGYYNTFVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICVTRASGFDLKVVIADLKDVDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHDNGVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIGQRVHGLASVFALGLKKLGTVEVQDLPFFDTVKVKVAHTSAIADEAYKSEINLRTINGNTITVAFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEVQTSIPSGLIRESPYLTHPIFNTYHTEHELLRYIHRLESKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFSNLGELLCSITGFDSFSLQPNAGAAGEYAGLMLIIDKLKCARGDNHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNINIEELRKAAETNKDNLSALMVTYPSTHGVYEEGIDVICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPDKSLPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKTAILNANYMAKRLENYYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEVAEIEKGKADINNNVLKGAPHPPSLLMGDAWTKPYSREYAAFPASWLRVAKFWPTTGRVDNVYGDRNLICTLQPASQVVEEQAAAQA 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0719 1054 CDD GDC-P 565 961 IPR020581 GO:0004375|GO:0006546
Lal8g0719 1054 SUPERFAMILY PLP-dependent transferases 96 522 IPR015424 -
Lal8g0719 1054 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 87 1045 IPR003437 GO:0004375|GO:0006544
Lal8g0719 1054 Gene3D - 176 436 IPR015421 GO:0003824
Lal8g0719 1054 Gene3D - 604 830 IPR015421 GO:0003824
Lal8g0719 1054 TIGRFAM gcvP: glycine dehydrogenase 96 1038 IPR003437 GO:0004375|GO:0006544
Lal8g0719 1054 Gene3D Aspartate Aminotransferase, domain 1 165 518 IPR015422 GO:0003824
Lal8g0719 1054 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1054 - -
Lal8g0719 1054 Pfam Glycine cleavage system P-protein 540 816 IPR020581 GO:0004375|GO:0006546
Lal8g0719 1054 Pfam Glycine cleavage system P-protein 96 522 IPR020581 GO:0004375|GO:0006546
Lal8g0719 1054 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1054 IPR020581 GO:0004375|GO:0006546
Lal8g0719 1054 CDD GDC-P 145 522 IPR020581 GO:0004375|GO:0006546
Lal8g0719 1054 Gene3D Aspartate Aminotransferase, domain 1 853 992 IPR015422 GO:0003824
Lal8g0719 1054 SUPERFAMILY PLP-dependent transferases 557 1040 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0719 Lal-Chr8 5117674 5123812 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0719 K00281 - gmx:100819714 1830.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0719 8 5117674 5123812 Lal8g0719 8 5117674 5123812 ECH
Lal8g0719 8 5117674 5123812 Lal21g0264 21 1754593 1761242 PCT
Lal21g0264 21 1754593 1761242 Lal8g0719 8 5117674 5123812 PCT