Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0264 ATGGAACGTGCTCGTAGACTCGCGAATCGGGCAATTCTGAAGCGCCTTGTTTCCGAGACAAAGCAGAATCGGCAGAAAGATTCTATATTGAATTCATCAACACCTGTTTTGTACACCCAGTCCAAATTCATTTCATCAATTCCCTCTTCCTCTGTTTTCAGAAACAGGGGATCCAAAACAGAGAACTTTCTTTCACGAAATGTTGGTTCTTCATCTCAAACTCGGCCCATTTCTGTTGAGGCACTGAAACCAAGTGACACATTCCCTCGTAGACACAACTCAGCCACACCAGAAGAACAGAGCAAGATGGCTAACACATGTGGCTTTGACAACCTTGACTCACTCATCGATGCAACCGTGCCTAAAGCGATACGTTTGAGCAAGATGAAGTTTGACAAGTTCGATGAAGGCTTAACAGAGGGTCAGATGTTGGAGCATATGAGTTATTTAGCTTCAAAGAATAAAGCTTTCAAATCATTCATTGGTATGGGATACTATAACACACATGTTCCACCAGTTATATTGAGAAACATATTGGAAAACCCTGCTTGGTACACTCAGTATACTCCTTATCAGGCTGAGATATCTCAAGGGCGTCTTGAATCCTTGCTGAATTATCAAACCGTGATCACTGATCTCACTGGTTTGCCTATGTCAAATGCTTCATTGCTTGATGAAGGAACTGCTGCAGCTGAAGCAATGTCTATGTGTAATAACATTCTGAAGGGAAAAAAGAAGACTTTTATCATTGCCTCTAACTGTCATCCACAAACCATTGATATTTGTAAGACTAGAGCTGCTGGTTTTAATCTTAAGGTGGTTACTGAAGATCTTAAGGATATTGATTACAAATCAGGTGATGTTTGTGGTGTTCTTGTTCAGTATCCGGGTACTGAGGGTGAGGTTTTGGATTATGGGGAGTTTATTAAGAAGGCTCATGCTAATGGAGTCAAGGTTGTTATGGCAACTGATTTGTTGGCATTGACTGTGCTGAAACCTCCTGGTGAATTAGGGGCAGATATTGTTGTTGGTTCTGCTCAGAGGTTTGGGGTTCCAATGGGTTATGGAGGTCCTCATGCTGCGTTCCTCGCCACATCTCAAGAGTATAAGAGGATGATGCCTGGAAGAATTATTGGTCTTAGTGTTGACTCTTCTGGAAAGACTGCGTTGCGGATGGCCATGCAAACTAGGGAGCAACATATTCGAAGGGACAAGGCTACCAGCAACATTTGCACTGCTCAGGCACTGCTGGCAAACATGGCTGCTATGTATGCTGTGTATCATGGACCTGAAGGCCTGAAAATCATCGCGGAAAGGGTTCATGGTCTTGCTGGGGTATTTGCCCTAGGATTAAAGAAGCTTGGAAATGTGGAAGTTCAGGATCTTCCCTTCTTTGACACTGTGAAGGTTAAGACTGCCGATGCCCATGCAATTGCTGATGCTGCTCACAAAAGTGAAATTAATTTGCGAGTTGTCGATGGGAACACTATCACTGTTGCCTTTGATGAAACCACCACCTTGGAGGATGTTGATGAGCTTTTCAAAGTTTTTGCTGGTGGAAAGCCTGTTTCCTTCACTGCTGCATCCCTTGCACCAGAGTTTCAGACTGCACTTCCTTCTGGACTTATTAGGAAGAGCCCTTATTTGACACACCCGATCTTTAACACGTACCACACTGAGCATGAGTTGCTTAGGTACATTCATAGGCTAGAATCAAAAGATCTCTCGCTGTGTCACAGTATGATACCGTTGGGATCTTGTACAATGAAGTTGAATGCAACAACTGAAATGATGCCAGTTACATGGCCTAGCTTTGCAGGCATTCACCCTTTTGCACCCACTGAGCAGGCTCAAGGTTATCAGGAAATGTTCACTAATATGGGTAACCTGCTGTGTACCATCACTGGGTTTGACTCCTTCTCTCTGCAACCAAATGCTGGTGCTTCTGGAGAATACGCCGGACTGATGGTTATTCGTGCATATCATAGGGCAAGAGGAGATCACCACCGCAATGTTTGCATCATACCTGTTTCCGCGCATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTAACTATTGGAACAGATGCCAAGGGAAACATTAATATTGAAGAGTTGAGGAAGGCTGCTGAAACAAACAAGGACAACTTATCTGCACTTATGGTTACATATCCTTCAACACATGGTGTTTATGAAGAGGGTATTGATGAGATATGCAAGATAATTCACGATAACGGAGGCCAAGTATACATGGATGGGGCTAACATGAATGCACAGGTTGGACTTACAAGCCCAGGTTGGATTGGAGCTGATGTTTGCCATCTGAATCTCCATAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCGCCATTTCTACCTTCACATCCAGTGATTGCTACTGGGGGCATTCCTGCACCTGAGGAATCTCAGCCACTTGGTACAATTTCTGCTGCACCATGGGGCTCAGCACTGATATTGCCAATCTCTTACGCCTATATAGCGATGATGGGTTCAAAGGGACTCACTGATGCATCAAAGATAGCCATTTTGAATGCAAATTACATGGCAAAACGATTGGAGAATCATTACCCTGTTCTTTTCCGGGGAGTCAATGGAACATGTGCTCATGAATTCATTATTGACTTAAGGGGCTTTAAGAATACTGCTGGGATAGAACCTGAAGATGTCGCAAAGCGCCTCATCGACTATGGGTTTCATGGACCTACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAGCCTACTGAAAGTGAAAGCAAGGCTGAATTAGACAGGTTTTGTGATGCTCTTATTTCCATCCGAGAAGAAATTGCTGAGATTGAGAAAGGAAAAGCTGACATTAACAACAATGTACTTAAGGGAGCCCCTCACCCACCATCACTTCTCATGGCAGATGCATGGACAAAACCATACACCCGAGACTATGCCGCCTTCCCAGCTTCATGGCTCCGTGTTTCGAAGTTCTGGCCTTCCACAGGACGTGTGGATAATGTGTATGGTGACCGCAACCTCATATGCACCCTTCAACAAACATCACAGGTTGTAGAAGAACAAGCTGCAGCAACAGCCTAA 3147 0.4436 MERARRLANRAILKRLVSETKQNRQKDSILNSSTPVLYTQSKFISSIPSSSVFRNRGSKTENFLSRNVGSSSQTRPISVEALKPSDTFPRRHNSATPEEQSKMANTCGFDNLDSLIDATVPKAIRLSKMKFDKFDEGLTEGQMLEHMSYLASKNKAFKSFIGMGYYNTHVPPVILRNILENPAWYTQYTPYQAEISQGRLESLLNYQTVITDLTGLPMSNASLLDEGTAAAEAMSMCNNILKGKKKTFIIASNCHPQTIDICKTRAAGFNLKVVTEDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHANGVKVVMATDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGLSVDSSGKTALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKIIAERVHGLAGVFALGLKKLGNVEVQDLPFFDTVKVKTADAHAIADAAHKSEINLRVVDGNTITVAFDETTTLEDVDELFKVFAGGKPVSFTAASLAPEFQTALPSGLIRKSPYLTHPIFNTYHTEHELLRYIHRLESKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAGIHPFAPTEQAQGYQEMFTNMGNLLCTITGFDSFSLQPNAGASGEYAGLMVIRAYHRARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNINIEELRKAAETNKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIATGGIPAPEESQPLGTISAAPWGSALILPISYAYIAMMGSKGLTDASKIAILNANYMAKRLENHYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIEKGKADINNNVLKGAPHPPSLLMADAWTKPYTRDYAAFPASWLRVSKFWPSTGRVDNVYGDRNLICTLQQTSQVVEEQAAATA 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0264 1048 TIGRFAM gcvP: glycine dehydrogenase 91 1032 IPR003437 GO:0004375|GO:0006544
Lal21g0264 1048 SUPERFAMILY PLP-dependent transferases 91 517 IPR015424 -
Lal21g0264 1048 Gene3D Aspartate Aminotransferase, domain 1 851 986 IPR015422 GO:0003824
Lal21g0264 1048 CDD GDC-P 140 517 IPR020581 GO:0004375|GO:0006546
Lal21g0264 1048 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1048 IPR020581 GO:0004375|GO:0006546
Lal21g0264 1048 Pfam Glycine cleavage system P-protein 91 517 IPR020581 GO:0004375|GO:0006546
Lal21g0264 1048 Pfam Glycine cleavage system P-protein 536 810 IPR020581 GO:0004375|GO:0006546
Lal21g0264 1048 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1048 - -
Lal21g0264 1048 MobiDBLite consensus disorder prediction 85 105 - -
Lal21g0264 1048 Gene3D Aspartate Aminotransferase, domain 1 160 513 IPR015422 GO:0003824
Lal21g0264 1048 SUPERFAMILY PLP-dependent transferases 552 1033 IPR015424 -
Lal21g0264 1048 CDD GDC-P 560 955 IPR020581 GO:0004375|GO:0006546
Lal21g0264 1048 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 82 1039 IPR003437 GO:0004375|GO:0006544
Lal21g0264 1048 Gene3D - 600 850 IPR015421 GO:0003824
Lal21g0264 1048 Gene3D - 171 431 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0264 Lal-Chr21 1754593 1761242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0264 K00281 - gmx:100819714 1868.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0719 8 5117674 5123812 Lal21g0264 21 1754593 1761242 PCT
Lal21g0264 21 1754593 1761242 Lal8g0719 8 5117674 5123812 PCT