Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0451 ATGGGGAACCCTGGATTGAGAAATTTCAATACAGGGCATCCAATATTTGGCTTATCTGAGCCCATTTCGGTGGCCGGACCAACTAAGAATGATGTGATCAAGACCCGCGAACTTGAGAAGTACTTGCAAGATGCTGGATTGTATGAGAGTAAGCAGGATGCAGCATGTAGGGAGGAAGTGCTTGGCAGGCTAGACCAGGTTGATTTTACCAATTTGTTAATTTCCTCTTTGTACCATCTTGGATACATAGGTAGCAACGTGATGTGTCATGATGCGGCTGCGTCAATGTGGTTTGGTGTGAGAATGCAATCACAGGATACTGCAGTTGCGGCCACATCTAGTGATGCGGTCCGCAGTTTGAAAACTGGTGTCATTGTGAAGATATGGGTTAAAAGGGTTAGCCGTGCAAAGGGATATGAACAACTGGTAGAATCAGCAAATGCCATGATATTTACCTCTGGCTCCTATCGGCTTGGGGTACATGGCCCTGGAGCTGATATAGACACTCTTTGTGTGGGACCTAGATATGCAAGCAGAGACGAAGATTTCTTTGGCGAGCTGCATAAGATACTAGCTGAGATGCCAGAAGTGACAGCATTGCTCTCTGTGCCTGATGCTTATGTCCCTGTGATGAAATTCAAGTTCAATGGAATACCTGTAGATCTCCTCTATGCAAGATTGTTTTTGTGGGTTATTCCTGAAGATTTGGATTTATCAAAGGAGTCAATATTACTTAACGTAGATGAACAAACTGTTCGTAGTCTCAATGGTTGTAGAGTAACTGATCAAGTCCTGCATTTGGTTCCAAATATTCAGAATTTTCGCACAACATTGAGATGCATGAGGTTTTGGGCAAAGCACCGTGGTCTTTATTCAAACGTTGCAGGATTTCTTGGTGGGATAAACTTGGCGTTGCTTGTTGCTCGAATATGCCAGCTATTTCCTAATGCATTACCTAATATGTTAGTGTCTCGGTTCTTTAGGGTATATACTCAATGGAAATGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTAGACTTCCAGTTTGGGATCCTAGAAGAAATCCCAAGGATAGATGTCATCTGATGCCTATAATTACTCCTGCTTACCCTTGCATGAACTCTAGCTACAACGTGACATCTAGTACATTGCGTATTATGTCGGACGAGTTTCAGAGGGGAAGTGAAATATGCATGGCTATGGAGGATTGCAAGGCTGATTGGGATATACTTTTTGAGCCATATCACTTTTTTGAAGCTTACAACAATTATCTACAGATAGACATTACGGCAAAGAATGTGGAGGATCTTAGACAATGGAAAGGCTGGGTTGGGTCTCGCCTCCGCCATTTGATATTGAGGATTGAGAAGCACACAAATGGCGCGCTTCTGTGCCATCCACATCCTGGAGAATTTTCAGACAAATCTAGACCTTTGCATCACTGTTACTTCATGGGTCTGCAACGCAATCAAGGAGTTCCAGTAAATGAAGGTGAACAATTTGATATAAGACGAACTGTTGAAGAATTTAAGTATTATGTCAACACATACAATGTATTGAAACCTGGCATGGACATTTGTGTGACCCATGTTAAACGGCGTAATGTACCTGGCTTCGTATTTCCTGGTGGTGTCCGGCCATCGCGCCAGTCTAAAGTGACCTGGGGGAGTAAGCGAAGTTCCGGATTAAGAGGTTCTGCCTCTGACCATGATCAAGCAGAAAAGTCTCAAGTAGGTGAAGCGGTTGTATTTGGAGCAGATAGCGGAAGGAAGAGAAAGCAACCAGAGGACAGCATGGATAATAATCCGAGGAATTCCAAATCTTCTTCCTTGAGAAGGGAAGTTCATGAAGATAGAAATCATATTAGTGCTTCTAGTATGAAATTTGATGACTCAGAAATCAATTGCATGGATGGCCAAAAGAGCGAGAAACCTTGTGGGGATAAGAAGACCAATGGATCAGTGAGAAGCAACCAAGAAGCCAACCATATATCTGTTGCTGCTTATATATCTCATTCTAGAGCTGCAGAAAATTTAGCCGCGCGGAAGATCATGTCCTGTCCGAATGACGATCAAGTTCCTGATGAGCTTCAAGATAATATTGAGTATAGAAATCAAGTCAAAGATATTGGCGGCGGGGACATGAAGAACAGCAGCTTAGATTCTTCAAACTCCAAGTCTGCAGTGGCAGAAGAGCAAGTTATTTTTAAGGGAACCACATGTTCTAATGGGGACTTGGAAGAGCTCGAGCCTGATGAGTTGACAGCACCATTTTTAAGTGGAACTCCTGCACCTGTACCAAAACGGAAGCCTCTAATCAGGATGAACTTCACAACCTTGGGGAAAGCTACTGAGAAATGTTCTTAA 2379 0.4304 MGNPGLRNFNTGHPIFGLSEPISVAGPTKNDVIKTRELEKYLQDAGLYESKQDAACREEVLGRLDQVDFTNLLISSLYHLGYIGSNVMCHDAAASMWFGVRMQSQDTAVAATSSDAVRSLKTGVIVKIWVKRVSRAKGYEQLVESANAMIFTSGSYRLGVHGPGADIDTLCVGPRYASRDEDFFGELHKILAEMPEVTALLSVPDAYVPVMKFKFNGIPVDLLYARLFLWVIPEDLDLSKESILLNVDEQTVRSLNGCRVTDQVLHLVPNIQNFRTTLRCMRFWAKHRGLYSNVAGFLGGINLALLVARICQLFPNALPNMLVSRFFRVYTQWKWPNPVMLCAIEEGSLRLPVWDPRRNPKDRCHLMPIITPAYPCMNSSYNVTSSTLRIMSDEFQRGSEICMAMEDCKADWDILFEPYHFFEAYNNYLQIDITAKNVEDLRQWKGWVGSRLRHLILRIEKHTNGALLCHPHPGEFSDKSRPLHHCYFMGLQRNQGVPVNEGEQFDIRRTVEEFKYYVNTYNVLKPGMDICVTHVKRRNVPGFVFPGGVRPSRQSKVTWGSKRSSGLRGSASDHDQAEKSQVGEAVVFGADSGRKRKQPEDSMDNNPRNSKSSSLRREVHEDRNHISASSMKFDDSEINCMDGQKSEKPCGDKKTNGSVRSNQEANHISVAAYISHSRAAENLAARKIMSCPNDDQVPDELQDNIEYRNQVKDIGGGDMKNSSLDSSNSKSAVAEEQVIFKGTTCSNGDLEELEPDELTAPFLSGTPAPVPKRKPLIRMNFTTLGKATEKCS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0451 792 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 419 545 IPR011068 GO:0003723|GO:0016779|GO:0031123
Lal8g0451 792 Gene3D Beta Polymerase, domain 2 125 262 IPR043519 -
Lal8g0451 792 Pfam Nucleotidyltransferase domain 144 227 IPR002934 GO:0016779
Lal8g0451 792 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 67 - -
Lal8g0451 792 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 123 721 - -
Lal8g0451 792 MobiDBLite consensus disorder prediction 713 732 - -
Lal8g0451 792 Gene3D Poly(A) polymerase predicted RNA binding domain 420 535 - -
Lal8g0451 792 Pfam Poly(A) polymerase central domain 17 418 IPR007012 GO:0004652|GO:0043631
Lal8g0451 792 CDD NT_PAP_TUTase 140 268 - -
Lal8g0451 792 PANTHER POLY A POLYMERASE 123 721 - -
Lal8g0451 792 PANTHER POLY A POLYMERASE 1 67 - -
Lal8g0451 792 MobiDBLite consensus disorder prediction 590 604 - -
Lal8g0451 792 MobiDBLite consensus disorder prediction 638 654 - -
Lal8g0451 792 Pfam Poly(A) polymerase predicted RNA binding domain 421 480 IPR007010 GO:0003723|GO:0043631
Lal8g0451 792 SUPERFAMILY PAP/OAS1 substrate-binding domain 269 418 - -
Lal8g0451 792 Gene3D - 263 416 - -
Lal8g0451 792 MobiDBLite consensus disorder prediction 611 630 - -
Lal8g0451 792 SUPERFAMILY Nucleotidyltransferase 124 266 IPR043519 -
Lal8g0451 792 MobiDBLite consensus disorder prediction 542 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0451 Lal-Chr8 3002693 3008297 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0451 K14376 - gmx:100816915 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0680 23 9468482 9474934 Lal8g0451 8 3002693 3008297 ECH
Lal8g0451 8 3002693 3008297 Lal8g0451 8 3002693 3008297 ECH