LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal8g0305	ATGATGGTGCAACAAAAAATGATAAATCTTGTTCCAGGAGTTCTATTGAAGCTTCTGCAGCATATGAACACAGATATGAATGTTTCTGGAGAGCACAGGTCATCACTGTTGCAAATTGTGAGTATTGTTCCAGCACTTGCAGGGGGTGAGTTGTTCCCAAACCAAGGTTTTTATCTCAAGGTCTCAGATTCATCTCATGCCACATTTGTGTCTCTCCTTAATGAAGATGTTGATCTCATCCTCAGTGATGAGATTCGGTTAGGGCAGTTTGTTTTTGTTGATAGGCTTGAGCCTGCTTCTCCTGTTCCTATCCTTCATGGGGTTAGGCCTGTCCCTGGTAGACACCCTTGTGTAGGAACCCCTGAAGATATTGTTGCAACTCATTCATTTGGTTTTTTTGATAACAATAACACTGACAATGACAATAATGATAGGAATGGGAATATGAATAGGGATAGTGTTAGTTCTGGTAGTATAAACATGGATAGATCAAAACCTCCTATGAAAGTGGTTGGATATCGCGGTGTTATTGGAGAGAAGGAGAAAGGGAAGAAAGTTATTAAATCAGTGAATGTTGGTGATCGCGATGCTGCTAAGGAGGAGCAATCAGAGAAGAAAAGTTCTGTTCTTGGTAGATTGAAATCTCAACCAACAAGGGCAGGATTGGCATTGAAGGCTATTCTGAAGAAGGAAAAGGATCAATCATTGGTTCAGTCGAGGTCTACGAGTTCGTGGTCGACTTCTATTCCTCCATCGCCGAGAAGTTTCTGTTCGTTACCTAGCTCCTTTGACAAGTTTGCCAATGGGGTCAAGGGAGTTGACAAGCTTACTGGTAAGGTTAAGGGAGTGGACAAGCTTACTGGTAAGGTTGGTGTGGTAGATACAAGAAAAGCTGTTCATGCTGCTAGTCCTTCTGCGAGGAAAATTGGAGTGGGAAATCCAGTAAAAAATTTGGTGCAGGGAATTGAGTCGGGGGCTAAAGCGATGCGTAAGAGCTGGGAAGGGAGTATGGAGGTTAGGAGTACAAGAGAACCTTCCAAACAAAGGCCAGCCACCAAGTATGATCCTAATCCTAATGTTCTTAGCGTGACTCGTACGAGAAGATTTTCGAGTGAGAGGTTGTTCTTTAAAGAGGAGAACAGGATCAAAGCATCAATAAAGCAATGTAAGGAAGAACATAAGACTCAAATGTCAGTAAAGAAGGCTACTGTTAATGGAACTACGGTGGATCATGAAAATTCGAATAAGCAAAGAACTTCCGTCGGAAAGAAATCACCAGAATGTTCAAACAATGGATTCCCTGGAAACTTGGTCAAAGTTTCACTAAGTAATAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCCCTCCCATCGTCTATATCAAAGCTTGGGAAGGAAATAATGAAGCAGAGAGATGCAGCACAGATGGCAGCAGCTGAAGCTATGCAAGAGGCTGTAGCTGCAGATAGTTTGCTGCAATGTCTAATTGAGTATTCGGAGCTAAGTAGTTCGGCTAAGGAACAGAACCCACAGCCAGCAGTGGAGCAGTTTTTAAGTCTTAATGCTAGGCTGAATAGTATCAAGATGATTGCTGAATCCTTAATACAAGATAGTTCATCTCCAGATTCTGAAAGCAGCACAATTGAAGAAGCACGGGAAGTAAAAACAGAGAGACGAAAACATGCGGCTTCCTGGGTCCAAGCGGCATTAGCCACGAATCTATCACCCTTTTCTGTTTTTACTGAAGAACCTCAATCATCCAGGCTTCCAGCTTCAAGCAATTCTCAAAATCAAAAGACTATACAGGGAAGTCAGCACATGCTAATCCTGCACAATTCAAGTGAAGACGTTTCGTCAAAAGCTCCACTAAAAACTCGCCTATCGGCTAATTCCAAGCTTGCCACTCAAGGCAGACCACCAAGTGGTGCATTAGCAAACAGGCACAAGCAACAAGTCCAACCACTCCCTGAGTGGATTAAAGGAAATGGCCTCTATGAGGTGCTTAATTTGGTTGAAATGTTGCAGTTACAATCCCGAGACTGGTTTTTAGGATTTGTTGAGAGATTCTTAGACACTGATGGTGATACTGCCTTGTCAGATAACAGCAAAATAGCAGGTATGCTCACTCAACTAAAGAGCGTAAACGATTGGTTAGACGAGATAGGGTCAAGCAAAGGGGATGAGGAAGAATCAAGCCGGATTTCATCACAGACGATAAACTTATTGCGAAACAAGATATATGAGTATCTTCTAACACATGTTGAATCTGCAGCTGCTGCACTCAGTGTTAGATCACAATCAATGCAAAAGATACAAACAACAAAGATTAAAACCAAAAGCTGA	2346	0.4224	MMVQQKMINLVPGVLLKLLQHMNTDMNVSGEHRSSLLQIVSIVPALAGGELFPNQGFYLKVSDSSHATFVSLLNEDVDLILSDEIRLGQFVFVDRLEPASPVPILHGVRPVPGRHPCVGTPEDIVATHSFGFFDNNNTDNDNNDRNGNMNRDSVSSGSINMDRSKPPMKVVGYRGVIGEKEKGKKVIKSVNVGDRDAAKEEQSEKKSSVLGRLKSQPTRAGLALKAILKKEKDQSLVQSRSTSSWSTSIPPSPRSFCSLPSSFDKFANGVKGVDKLTGKVKGVDKLTGKVGVVDTRKAVHAASPSARKIGVGNPVKNLVQGIESGAKAMRKSWEGSMEVRSTREPSKQRPATKYDPNPNVLSVTRTRRFSSERLFFKEENRIKASIKQCKEEHKTQMSVKKATVNGTTVDHENSNKQRTSVGKKSPECSNNGFPGNLVKVSLSNRKVTDASVQWASLPSSISKLGKEIMKQRDAAQMAAAEAMQEAVAADSLLQCLIEYSELSSSAKEQNPQPAVEQFLSLNARLNSIKMIAESLIQDSSSPDSESSTIEEAREVKTERRKHAASWVQAALATNLSPFSVFTEEPQSSRLPASSNSQNQKTIQGSQHMLILHNSSEDVSSKAPLKTRLSANSKLATQGRPPSGALANRHKQQVQPLPEWIKGNGLYEVLNLVEMLQLQSRDWFLGFVERFLDTDGDTALSDNSKIAGMLTQLKSVNDWLDEIGSSKGDEEESSRISSQTINLLRNKIYEYLLTHVESAAAALSVRSQSMQKIQTTKIKTKS	781

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	409	432	-	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	582	602	-	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	188	208	-	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	136	162	-	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	536	556	-	-
	Lal8g0305	781	PANTHER	DUF936 FAMILY PROTEIN	7	780	-	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	333	350	-	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	237	252	-	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	333	360	-	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	136	168	-	-
	Lal8g0305	781	Pfam	Plant protein of unknown function (DUF936)	10	762	IPR010341	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	188	214	-	-
	Lal8g0305	781	PANTHER	EXPRESSED PROTEIN	7	780	IPR010341	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	233	252	-	-
	Lal8g0305	781	MobiDBLite	consensus disorder prediction	631	650	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal8g0305	Lal-Chr8	2046777	2051005	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal8g0305	-		-	lang:109358192	1215.29

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal8g0305	8	2046777	2051005	Lal8g0305	8	2046777	2051005	ECH
	Lal25g0361	25	2442894	2448074	Lal8g0305	8	2046777	2051005	LSH
	Lal10g1073	10	17700153	17704574	Lal8g0305	8	2046777	2051005	LSH
	Lal8g0305	8	2046777	2051005	Lal2g0171	2	1016416	1032765	PCT
	Lal2g0171	2	1016416	1032765	Lal8g0305	8	2046777	2051005	PCT