Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1073 ATGCCTATTGAAGAAGGTGTTGGTAAACAAAAAATGGCAAATCTTGTTCCTGGGGTGCTTTTGAAGCTTCTGCAGCATATGAACACAGATGTGAAGGTTGCTGGAGAACACAGGTCATCACTTTTACAAGTTGTGAGCATTGTTCCAGCACTTTCAGGTGGTGAGTTGTTCTCAAACCAAGGTTTTTATCTTAAGGTCTCAGATTCATCTCATGCTACATATGTGTCTCTCCCTGATGAACATGATGATCTTATTCTCAGTGATAAGATTCAGTTAGGACAGTTTGTTTTTGTTGATAGGCTTGAGGCTGCTTCTCCTGTTCCAATCCTTCATGGGGTTAGGCCTGTCCCTGGTAGACACCCTTGTGTTGGAACCCCTGAAGATATTGTTGCAACTCATTCACTTGGTTTTCTTGATAATAACAGTGACAATGATAACAAGAACAGTATTAAGAGTAGGAATAGTTTTAGTTCTTGTAGTATAGACATGGAGAGATCAAAATCTCCTAGGAAAGTGGTGGGAAATCGTGCCGTTGTTGGTGATAAGGAGAAGGAGAAGAAAGTTATTAGATCATCAAATGTTGGTGGTGGTGGTAGTGTTGGCACTAAGGAGGAGAAACCAGAGAAAAGAAGTGTTGTTCTTGCTGGATTAAAATCTCAGCCAACAAAACCAGCAGGAGCAGGACTGAAGATCAATGTGAAGAAGGAAAAGGAATCATCTATGGCTCGATTGAGGTCTATGAGTTCACGGTCGATTCCTGTTCCTTTGTCGCCAGGTAGTTGCTATTCGTTGCCTAGTTCTTTTGAGAAGTTTGCCAATGGTGTCAAGCAGCATCAAGCAAAGGTTAAGGGAGTGGACAAGCTTACTGGCAAAGTTGGTGTGGTGAATACAGGAAAGGCTGTCCGTTCAGCTAGTCCTGCTGCGAGGAAAACTGGAATGGGAAATCCAATCACGAATTTGGTGCAGGGAATTGAGCTGGGGGCTAAGGCGCTGCGTAAGAGCTGGGAAGGGGGTATGGAGGTTAAGACTAGAGAGACTTCCAAAGCAAGGGCAGCCACCAAGTATGATCGCGAGCCTGAAGTTCGTAGCTCGACTCATAGGACAAGTTTTTCAAGTGAGAGGTTATCGTCTAAAGAGGAGAGCAGGATCCAAGCATCACCAAAGCCATCTAAGGAAGAGCATAAGACTCAAATGTCTGTAAAGAAGGCTAATGCTAACGGAACTATGGAGGAACAAGGAAAGTCAAGTAAGCAAAGAACTTCCATCGGAAAGAAATCAGCAGAAGGCTCAGACAACAGATTCCCTGGAAACATGGTCAAAGTTTCTCTAAATAGTAGAAAAGTGACAGATGCAAGTGTTCAGTGGGCTTCACTCCCATCATCTATTTCAAAGCTTGGGAAGGAAGTAATGAAGCAAAGAGACGCAGCACAGATGGCAGCAACTGAGGCTATGCAAGAGGCTGCTGCTGCAGATAGCTTGCTGCAATGTATGAGTATTTATTCGGAGCTAAGTAATTCTGCTAAGGAACAGAACCCACAGCCAGCAGTGGAGCAGTTTTTAACTCTTAATGCTAGCCTGAGTAGTACCAAGACGATTGCTGAATCCTTATCGAAATCCATTCCAGACAGTTCAACTCCAGATTCTGAAAGGAGCACAATGGAAGAAGCACTAAAAGTAAAAACAGATAGACAAAAACATGCGGCTTCCTGGGTCCAAGCGGCCTTAGCCACGAATCTATCACCCTTTGCTGTTTTTACAAAAGAACCTCAATCATGCAGGCTTCCAGCTTCAAGCAATTCTCAAAATCAAAAGACTATACTGGGAAGTGAATACATGTTAGTCCTACACAATTCAAGTGAAGACACTTTGTCAAAAGCTCCAGGAAAAACTCGCCCGGTGGCTAATTCGAAGCATGGCTCACAAGGAACTGCTCGCAGACTAAGTGACGTGTTAGCGAATGGGCACAAGCAACAAGTCCAACAGCTCCCTGAGTGGGTTAAAGGAAATGGCCTCGACGAGGTGGTTAATTTGGCTGAAATTCTGCAATTACAATCTCGAGACTGGTTTTTGGGATTTGTCGAGAGATTCTTGGACACTGATGGTGACACTACCTTGTCAGATAACGGCCAAATAGCAGGTATGCTCACTCAACTAAAGAGTGTAAATGATTGGTTAGACGAGATTGGGTCAAGCAAGGAGGACGATGGAGAATCACACCAGATATCAGCAGAGACGATTGAACGATTGCGGAAGAAGATATACGAGTATCTTCTTACACATGTCGAATCTGCAGCTGCAGCACTCGGTGGTGGATCACAACCATCACCTCAGATTAAAACCAAAAGGTGA 2349 0.4398 MPIEEGVGKQKMANLVPGVLLKLLQHMNTDVKVAGEHRSSLLQVVSIVPALSGGELFSNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPILHGVRPVPGRHPCVGTPEDIVATHSLGFLDNNSDNDNKNSIKSRNSFSSCSIDMERSKSPRKVVGNRAVVGDKEKEKKVIRSSNVGGGGSVGTKEEKPEKRSVVLAGLKSQPTKPAGAGLKINVKKEKESSMARLRSMSSRSIPVPLSPGSCYSLPSSFEKFANGVKQHQAKVKGVDKLTGKVGVVNTGKAVRSASPAARKTGMGNPITNLVQGIELGAKALRKSWEGGMEVKTRETSKARAATKYDREPEVRSSTHRTSFSSERLSSKEESRIQASPKPSKEEHKTQMSVKKANANGTMEEQGKSSKQRTSIGKKSAEGSDNRFPGNMVKVSLNSRKVTDASVQWASLPSSISKLGKEVMKQRDAAQMAATEAMQEAAAADSLLQCMSIYSELSNSAKEQNPQPAVEQFLTLNASLSSTKTIAESLSKSIPDSSTPDSERSTMEEALKVKTDRQKHAASWVQAALATNLSPFAVFTKEPQSCRLPASSNSQNQKTILGSEYMLVLHNSSEDTLSKAPGKTRPVANSKHGSQGTARRLSDVLANGHKQQVQQLPEWVKGNGLDEVVNLAEILQLQSRDWFLGFVERFLDTDGDTTLSDNGQIAGMLTQLKSVNDWLDEIGSSKEDDGESHQISAETIERLRKKIYEYLLTHVESAAAALGGGSQPSPQIKTKR 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1073 782 PANTHER EXPRESSED PROTEIN 12 781 IPR010341 -
Lal10g1073 782 MobiDBLite consensus disorder prediction 338 438 - -
Lal10g1073 782 Pfam Plant protein of unknown function (DUF936) 15 768 IPR010341 -
Lal10g1073 782 PANTHER DUF936 FAMILY PROTEIN 12 781 - -
Lal10g1073 782 MobiDBLite consensus disorder prediction 535 554 - -
Lal10g1073 782 MobiDBLite consensus disorder prediction 372 399 - -
Lal10g1073 782 MobiDBLite consensus disorder prediction 400 427 - -
Lal10g1073 782 MobiDBLite consensus disorder prediction 621 643 - -
Lal10g1073 782 MobiDBLite consensus disorder prediction 183 208 - -
Lal10g1073 782 MobiDBLite consensus disorder prediction 338 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1073 Lal-Chr10 17700153 17704574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1073 - - lang:109358192 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0361 25 2442894 2448074 Lal10g1073 10 17700153 17704574 LSH
Lal10g1073 10 17700153 17704574 Lal8g0305 8 2046777 2051005 LSH
Lal10g1073 10 17700153 17704574 Lal2g0171 2 1016416 1032765 PCT
Lal2g0171 2 1016416 1032765 Lal10g1073 10 17700153 17704574 PCT