Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0284 ATGGCTATCTCTTCAATTTTCTTGTTAGCTACGTTTTCTTTCATATATGGCAATGCTGTTCTTCCCATTGAAGCTACCCACCATGTTTATAGAAATCTTCAGAGCCTAACTTCTGATTCCTCCAATCAACCTTATAGAACTGCTTATCATTTTCAACCTCCCAAGAATTGGATAAATGGACCAATGAGATATAAAGGACTCTACCACCTTTTCTATCAATACAATCCAAAAGGTGCAGTTTGGGGCAACATTGTATGGGCCCACTCAATATCAAAGGATCTCATAAATTGGACCCCACTAGATCATGCCATCTTCCCTTCTCAACCATCAGATATCAATGGTTGTTGGTCTGGCTCAGCCACTATACTCCCTGGGGGCAAACCTGTCATTTTATACACAGGAATTGACCCAATGAAAAACCAAGTACAAAACTTAGCCTACCCCAAAAACATGTCTGATCCATTACTTAGGGAATGGGTTAAGTCACCAAAAAATCCACTAATGGCACCAACTATTGCTAACAAAATTAATTCAAGCTCATTTAGAGACCCTACCACTGCATGGTTAGGGAAAGATGGGTATTGGAGGGTAATAATTGGAAGCAAAAGAAATACTAGGGGAATGGCAATTTTGTATAAAAGCAAAGATTTTGTTAATTGGGTTCAAGCCAAACATGCATTACTTTCAGCCCAAGGCACTGGAATGTGGGAGTGTCCTGATTTTTATCCAGTACTTAATAAGAGACCATTTTCTATTGGTATTGATACATCAATGAATGGTGATGATGTTATGCATGTGCTTAAGGTTAGCTTGGATGATACAAAACATGACCATTATTTGGTTGGGAGATATAACATTGCCAATGATATCTTTGTTCCTTATATTGGATTTGAGGATAACCAATTTGTGTTGAGATATGATTATGGGAAATATTATGCCTCAAAAACCACTTTTGATGATGGAAAGAACAGAAGGATCTTGTTTGGTTGGGTTAATGAATCCTCAAGTGTTGCAGATGATATCAACAAAGGATGGTCTGGAATCCATGCTATTCCAAGGGCTATCTGGCTTCATAACTCTGGGAAACAATTGGTACAATGGCCCATCCAGGAAATTGAAAGCCTACGTGTGAACCCTGTAAATTTCCCCACCAAAGTGCTCAAGGGTGGTGAGCTACTTCAAGTTCCTGGTGTCACTGCAGCACAGGCTGATGTTGAAATATCATTTGAAGTGAATGAGTTTGAAAAGGCAGAAGTATTGAAATCATGGACAAACCCCCAGATTCTGTGTGGCAAAAAGGGTGCAGCTGTTAAAGGTGGATTAGGACCTTTTGGTCTGTTAGTTTTTGCTTCTAAAGGCTTGGAAGAGTACACAGCAGTGTTCTTCAGAATATTTAGCTATCAGCACAAATATTTGGTGCTCATGTGCAGTGACCAAAGCAGATCATCATTGCATAAAGATAATGATATGACAACTTATGGTACTTTTGTGGATGTGGACCCTCTTCATGAGAAGCTGTCTCTAAGAAGTTTGATTGATCACTCTGTAGTAGAGAGTTTTGGGACAGAGGGAAGGGCTTGTATCACATCTAGAGTTTATCCTACATTGGCAATCAATGACAAGGCACAACTATATGCTTTTAACAATGGAACTGCCAATGTCAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAAGCAAGAATCAATTGA 1713 0.3929 MAISSIFLLATFSFIYGNAVLPIEATHHVYRNLQSLTSDSSNQPYRTAYHFQPPKNWINGPMRYKGLYHLFYQYNPKGAVWGNIVWAHSISKDLINWTPLDHAIFPSQPSDINGCWSGSATILPGGKPVILYTGIDPMKNQVQNLAYPKNMSDPLLREWVKSPKNPLMAPTIANKINSSSFRDPTTAWLGKDGYWRVIIGSKRNTRGMAILYKSKDFVNWVQAKHALLSAQGTGMWECPDFYPVLNKRPFSIGIDTSMNGDDVMHVLKVSLDDTKHDHYLVGRYNIANDIFVPYIGFEDNQFVLRYDYGKYYASKTTFDDGKNRRILFGWVNESSSVADDINKGWSGIHAIPRAIWLHNSGKQLVQWPIQEIESLRVNPVNFPTKVLKGGELLQVPGVTAAQADVEISFEVNEFEKAEVLKSWTNPQILCGKKGAAVKGGLGPFGLLVFASKGLEEYTAVFFRIFSYQHKYLVLMCSDQSRSSLHKDNDMTTYGTFVDVDPLHEKLSLRSLIDHSVVESFGTEGRACITSRVYPTLAINDKAQLYAFNNGTANVKITRLSAWSMKKARIN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0284 570 CDD GH32_Fruct1-like 56 357 - -
Lal8g0284 570 Pfam Glycosyl hydrolases family 32 N-terminal domain 50 368 IPR013148 -
Lal8g0284 570 Gene3D - 379 564 - -
Lal8g0284 570 Gene3D Glycosyl hydrolase domain; family 43 54 378 IPR023296 -
Lal8g0284 570 SUPERFAMILY Concanavalin A-like lectins/glucanases 368 566 IPR013320 -
Lal8g0284 570 PANTHER CELL-WALL INVERTASE 2 570 - -
Lal8g0284 570 SUPERFAMILY Arabinanase/levansucrase/invertase 41 369 IPR023296 -
Lal8g0284 570 SMART glyco_32 50 524 IPR001362 GO:0004553|GO:0005975
Lal8g0284 570 Pfam Glycosyl hydrolases family 32 C terminal 371 563 IPR013189 -
Lal8g0284 570 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0284 Lal-Chr8 1916999 1921182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0284 62 570 Glycoside Hydrolase AT3G13790 65.377 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0284 K01193 - gmx:100776791 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0284 8 1916999 1921182 Lal20g1087 20 14989977 14994423 PCT
Lal20g1087 20 14989977 14994423 Lal8g0284 8 1916999 1921182 PCT