Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0019 ATGGACATAGGATCCCCAACTAACGTGCGCCATGTTGCACATGTGACCTTTGATAGCTTCAATGGTTTCCTGGGTTTGCCTGCTGAATTCGAGCCTGAGATGCCCAGAAGGCCTCCCAGTGCTAGTGCAACTGTGTTTGGTGTTTCAACAGAATCCATGCAGTTGTCATTTGACTCAAGAGGAAACAGTGTGCCAACTATTCTGTTGCTAATGCAAACTCGTTTGTATGCTCAACGGGGGTTGCAGGCAGAGGGAATTTTCAGAATTAACCCAGATAATAGTCACGAGGAACATGTTAGGGATCAATTGAATTTGGGATTGGTCCCAGATGGCATTGATATACATTGTTTGGCGGGACAAATTAAGGCTTGGTTTAGGGAACTTCCTACAGGCGTTCTGGATCCACTGTCACAGGAACAGGTAATGCAATGCCAGACGGAAGAAGAATGTGCTGAACTAGTGAAGCATCTACCTCGCACTGAAGCTGCCCTACTTGACTGGGCCGTCAATCTCATGGCTGATGTTGTCGAACATGAACATCTGAATAAGATGAGTGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCATATGGCAGACCCTTTCACTGCATTGGTATATGCAGTTCAAGTGATGAACTTCTTGAGGACACTTATAGCAAGGACACTACAGGAAAGGAAGGATTCCGTGGTAGAATCATCTCCTACATGTTATTTAGAACCTTTGGATGAGAAGGCACGCCATAGAATCTTGGAGTCCTGCATGGAAAATACTGCTCCGGAAAACAAACAACAAAAAAAGCCTCTTCCTACTGCAGAAAATGAAGAGGCTCAGGAAAACTTGGTTGCTGTCTTAGATAACGCCTCAACTGGAGGACAATGTAGCAGTTTGATAAGCTCTTCAGACAATCCAGTTTGTGACAACGATTTGTATTGTGAGTTTCCACCCAAAGGAAACATGAGGAAAAGTAAGACTGTCCAATCAATTAGTTCAAATGCCCGAAACGGGCCTAAAAAAACAAGAAATCATCAAGCTGTTGAGAAAAAAGGAATTAGGACTTTAGATTAA 1074 0.4367 MDIGSPTNVRHVAHVTFDSFNGFLGLPAEFEPEMPRRPPSASATVFGVSTESMQLSFDSRGNSVPTILLLMQTRLYAQRGLQAEGIFRINPDNSHEEHVRDQLNLGLVPDGIDIHCLAGQIKAWFRELPTGVLDPLSQEQVMQCQTEEECAELVKHLPRTEAALLDWAVNLMADVVEHEHLNKMSARNIAMVFAPNMTHMADPFTALVYAVQVMNFLRTLIARTLQERKDSVVESSPTCYLEPLDEKARHRILESCMENTAPENKQQKKPLPTAENEEAQENLVAVLDNASTGGQCSSLISSSDNPVCDNDLYCEFPPKGNMRKSKTVQSISSNARNGPKKTRNHQAVEKKGIRTLD 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0019 357 PANTHER MKIAA1688 PROTEIN 1 336 IPR044785 GO:0005096
Lal8g0019 357 CDD RhoGAP 65 221 - -
Lal8g0019 357 Pfam P21-Rho-binding domain 2 30 IPR000095 -
Lal8g0019 357 MobiDBLite consensus disorder prediction 258 277 - -
Lal8g0019 357 Gene3D CRIB domain 1 34 IPR036936 -
Lal8g0019 357 Pfam RhoGAP domain 67 199 IPR000198 GO:0007165
Lal8g0019 357 MobiDBLite consensus disorder prediction 319 357 - -
Lal8g0019 357 ProSiteProfiles Rho GTPase-activating proteins domain profile. 48 233 IPR000198 GO:0007165
Lal8g0019 357 SMART PBD_5 3 37 IPR000095 -
Lal8g0019 357 Gene3D Rho GTPase activation protein 36 234 IPR008936 GO:0007165
Lal8g0019 357 SUPERFAMILY GTPase activation domain, GAP 43 222 IPR008936 GO:0007165
Lal8g0019 357 SMART RhoGAP_3 62 225 IPR000198 GO:0007165
Lal8g0019 357 MobiDBLite consensus disorder prediction 342 357 - -
Lal8g0019 357 MobiDBLite consensus disorder prediction 323 341 - -
Lal8g0019 357 ProSiteProfiles CRIB domain profile. 3 16 IPR000095 -
Lal8g0019 357 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0019 Lal-Chr8 237514 240375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0019 - K20642 lang:109350806 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0019 8 237514 240375 Lal8g0019 8 237514 240375 ECH
Lal8g0019 8 237514 240375 Lal2g0354 2 2124216 2127541 PCT
Lal2g0354 2 2124216 2127541 Lal8g0019 8 237514 240375 PCT