Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0354 ATGACCGAAGTGCTTCATTCCCCAGCATCCCATTTTTCTTCTTCCTCCTCCGATGGCATTCTCTCTCCTCCTCCACCTCCACCTCCTTCTGTAGTGGTGGAAGGTTTTTCTACGGTCACTGACTGTGACAGAGTGGAAGTAACAGACAACAATGAAAAGGGGTCAGGGGAACAGGAAGAGGTGTCCCTTTTGGCCATTCTTGTGACCCTTTTCAGGAAATCATTGATTGCTTGTAACAGTGTTGATAGGAGTGAGCTCTGTGCTATGGAGATTGGATGGCCCACTAACGTGCGCCATGTTGCGCATGTTACCTTTGATAGATTCAATGGCTTCTTGGGTTTGCCTGTTGAGTTTGAACCTGAAGTCCCTAGAAGGCCTCCTAGTGCCAGTGCTACTGTTTTTGGAGTTTCAACCGAATCCATGCAATTATCATATGACACAAGAGGGAACAGTGTGCCAACAATCCTGTTACTAATGCAAAGGCGCTTGTATGCCCAAGGAGGGTTACAGGCAGAGGGGATTTTCAGAATTAATGCAGACAATACTCATGATGAATATATTAGGGAACAATTAAATAGGGGATTGGTCCCAAATAACATTGATGTACATTCTTTGGCTGGACTTATCAAGGCTTGGTTTAGAGAACTCCCTACTGGTGTTCTGGATTCTTTATCGCCAGAGCATGTAATGCAATGCCAGACTGAAGAGAATTGTGCTGAACTAGCGAAGCAACTGCCTCACACTGAAGCTTCCCTCTTGGACTGGGCTATCAATTTGATGGCTGATGTTGTCCAACACGAACACCTGAATAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCGGATGGCAGACCCTATGACGGCATTGATGTATGCAGTTCAAGTGATGAACTTTTTGAAGACACTTATATTAAGAACACTGCGGGAAAGAAAGGATTCTGTGGTAGAACCATCTCCTGGATTTTGTTCAGAGCCTTTTGATGACAATGAGGACCATAGTGACCTTGTTTACTCCTTCCAGCAAGGTGCAGCCACAGAAAATGAAGAGGCTGGGGAAACCTTTGTTTCTCAGAAATCTGTATCAGAATGTTCCCCTGAGTCCCTCCAAAACATAAATTCAACTGAAGGAGAGTGTGGCAGTTTGGTAAGCTCCTATGAGGATCTACTTTGGAATGAAGATTTGCATTGCGAGTTTCCGCCGAAAGGAAAGGTTGAGAAGAGTAAGAGTGGCCAACCAGGTAGTTCAAGTACTATAAAGGGATTACAGAAAACCAAAGGCCGCCAACTTGTAACACATGGAACCATGGCTGTTGAAAAGGGTATTAGCAATCTGAGCCTCATAGATTCAAGATCGGAGCGAATAGAAGCCTGGCGGTGA 1395 0.4487 MTEVLHSPASHFSSSSSDGILSPPPPPPPSVVVEGFSTVTDCDRVEVTDNNEKGSGEQEEVSLLAILVTLFRKSLIACNSVDRSELCAMEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASATVFGVSTESMQLSYDTRGNSVPTILLLMQRRLYAQGGLQAEGIFRINADNTHDEYIREQLNRGLVPNNIDVHSLAGLIKAWFRELPTGVLDSLSPEHVMQCQTEENCAELAKQLPHTEASLLDWAINLMADVVQHEHLNKMNARNIAMVFAPNMTRMADPMTALMYAVQVMNFLKTLILRTLRERKDSVVEPSPGFCSEPFDDNEDHSDLVYSFQQGAATENEEAGETFVSQKSVSECSPESLQNINSTEGECGSLVSSYEDLLWNEDLHCEFPPKGKVEKSKSGQPGSSSTIKGLQKTKGRQLVTHGTMAVEKGISNLSLIDSRSERIEAWR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0354 464 Gene3D CRIB domain 87 120 IPR036936 -
Lal2g0354 464 CDD RhoGAP 153 309 - -
Lal2g0354 464 SUPERFAMILY GTPase activation domain, GAP 131 310 IPR008936 GO:0007165
Lal2g0354 464 ProSiteProfiles Rho GTPase-activating proteins domain profile. 136 321 IPR000198 GO:0007165
Lal2g0354 464 Pfam RhoGAP domain 154 287 IPR000198 GO:0007165
Lal2g0354 464 Gene3D Rho GTPase activation protein 124 319 IPR008936 GO:0007165
Lal2g0354 464 PANTHER MKIAA1688 PROTEIN 1 463 IPR044785 GO:0005096
Lal2g0354 464 MobiDBLite consensus disorder prediction 414 433 - -
Lal2g0354 464 MobiDBLite consensus disorder prediction 408 433 - -
Lal2g0354 464 MobiDBLite consensus disorder prediction 1 19 - -
Lal2g0354 464 Pfam P21-Rho-binding domain 90 116 IPR000095 -
Lal2g0354 464 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 463 - -
Lal2g0354 464 CDD CRIB 89 129 - -
Lal2g0354 464 SMART RhoGAP_3 150 313 IPR000198 GO:0007165
Lal2g0354 464 SMART PBD_5 91 125 IPR000095 -
Lal2g0354 464 ProSiteProfiles CRIB domain profile. 91 104 IPR000095 -
Lal2g0354 464 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0354 Lal-Chr2 2124216 2127541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0354 - K20642 gmx:100784019 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0019 8 237514 240375 Lal2g0354 2 2124216 2127541 PCT
Lal2g0354 2 2124216 2127541 Lal8g0019 8 237514 240375 PCT