Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1378 ATGGGTGAAGATCGTTCCGAGATAGTTTTCTTCGACGTGGAAACCACCGTCCCGACCCGACCCGGTCAAGGTTTTGCAATTCTTGAATTCGGAGCTATCCTCGTCTGCCCCAGGAAGCTCACCGAGCTCCGTAATTACTGCACCTTGGTCCGACCCGCCGACTCTTCTCTCATTTCACCCTTATCCGAACGCTGCAATGGAATCACCGCCGACGCCGTTTCCTCTGCTCCCACTTTCGCTGATATTGCTGATGCTGTTTATGATCTTCTTCACGGGAGAATATGGGCGGGTCACAATATAATAAGATTTGACTGCGTTCGAGTGAGAGATGCATTTGCCGAAGTTAATAAGACAGCCCCTGAACCCAAGGGTATTATTGATTCCTTAGTCTTGTTAACTCAAAAGTTTGGAAGAAGAGCTGGCAACATGAAGATGGCTACTCTTGCAACATATTTTGGGCTTGGACGCCAGACACATAGGAGCTTAGATGATGTTCGCATGAATCTTGAAGTCCTCAAATATTGTGCAACTGTTCTATTCTTGGAGTCAAGTCTCCCGGATATATTCACAGAAAATAGTTGGGTTTCACCTAATGCTGTCACAAGAAGTCGTAGTAATGTGAAATCTCCCACAGATGGGGGCTCATTGAGTACGAATAAGGATTCTGCAACTAAAACTACAGAAGAAAGCCATCCAATACGTTGTATCACAATGAGCAATGCAGAAGGGGCTCTCACAAATATTGCACATCGAGGGGATGCTTTTGACTTGGCTTCTCTTGGTGCTGAAATAACAAGTGAATCCATTCAGACAGATGTTGTCTTGGATGAGAAAGCTCAAGAGTCACCCAATATGTCTTCCCCGTCTTTAGAGTCTCATGCTACGAGCAGCTCTATTGTTGTTTTAGAACCTGATGAGATATCTATCCCTTCTATTGATGCATCCCTTGTTCCATTTTTTCGTGGCATTAGTAGGATAGAATTATTGCACAATGGTTTCCCGTTTCAGCTATGTTGTACTGGTCTGAAAGTAAGGTTTGGCATTAGCACAAAGTTTGTTGATCAAGCTGGCCGGCCACGGTTGAATTTTGTGGTTGATCCATCACCAAGCTTATGTAAGGTTCTTGATGCTTGTAACAATGTTGCACAAAAGTTATCCTTGGATTCTGGTAGCAGTTCTGATTGGAGGCCTGTTGTTATTAGAAAAGATGGCTTCTTCAACTATCCTACAATCAGATTGCATATACCAACAGCAGTAATCGGAGACATTGCCATCTATGCCACAGAGATATATCGAAAAGAATCATCAGGTGCTGAGCAAAGACTTATCTTCAGCAAGTTTGATGCTGCGGAACTTGGTTCCTTGTTTGTGCCTGGGACATTTGTTGATGCACTCTTCACCTTGGATCCGTATGACTATCAGCAGAATGCAGGGATTAAATTAGTTGCCAAAAAATTGTTCATTCATTCCAAGTAG 1476 0.4356 MGEDRSEIVFFDVETTVPTRPGQGFAILEFGAILVCPRKLTELRNYCTLVRPADSSLISPLSERCNGITADAVSSAPTFADIADAVYDLLHGRIWAGHNIIRFDCVRVRDAFAEVNKTAPEPKGIIDSLVLLTQKFGRRAGNMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTENSWVSPNAVTRSRSNVKSPTDGGSLSTNKDSATKTTEESHPIRCITMSNAEGALTNIAHRGDAFDLASLGAEITSESIQTDVVLDEKAQESPNMSSPSLESHATSSSIVVLEPDEISIPSIDASLVPFFRGISRIELLHNGFPFQLCCTGLKVRFGISTKFVDQAGRPRLNFVVDPSPSLCKVLDACNNVAQKLSLDSGSSSDWRPVVIRKDGFFNYPTIRLHIPTAVIGDIAIYATEIYRKESSGAEQRLIFSKFDAAELGSLFVPGTFVDALFTLDPYDYQQNAGIKLVAKKLFIHSK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1378 491 MobiDBLite consensus disorder prediction 199 230 - -
Lal7g1378 491 SUPERFAMILY Ribonuclease H-like 6 177 IPR012337 -
Lal7g1378 491 CDD DEDDh 9 173 - -
Lal7g1378 491 Pfam Exonuclease 9 172 IPR013520 -
Lal7g1378 491 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 2 490 - -
Lal7g1378 491 PANTHER PROTEIN NEN3 2 490 - -
Lal7g1378 491 Gene3D - 2 178 IPR036397 GO:0003676
Lal7g1378 491 SMART exoiiiendus 7 181 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1378 Lal-Chr7 18849153 18853175 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1378 - - ccaj:109808157 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1378 7 18849153 18853175 Lal7g1378 7 18849153 18853175 ECH
Lal14g1900 14 18390403 18393115 Lal7g1378 7 18849153 18853175 LSH