Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1900 ATGGGTTCAATTCCGAGTGAAGATCGTTCGGAGATAGTTTTCTTCGACGTGGAGACCACCATTCCGACCCGAAAAGGCCAAGGTTATGCCATTCTTGAATTCGGAGCTATTCTCGTTTGTCCCAGGAAGTTGACGGAGCTCCGAAACTACTGCACCTTGGTCCGACCCAAAGACTTATCTCTCATTTCACCCTCATCGGAACGTTGCAATGGCATTACCGCCGAAGCAGTTTCTTCTGCTCCCACTTTCGATCAAATTGCTGATACCGTTTATGATCTTCTTCATGGGAGGATATGGGCGGGTCACAATATCATAAGATTTGACTGTGTTAGGGTCAGAGATGCGTTTGGTGAGATTAATAAGACTGCACCTGAACCCAAGGGTACTATTGATTCTTTAGTCTTGTTAACTCAAAAATTTGGAAGAAGAGCTGGCAACATGAAGATGACTACCCTTGCGACATATTTTGGGCTTGGTTGCCAGACACATAGGAGCTTAGATGATGTTCGCATGAATCTTGAAGTCCTCAAATATTGTGCAACAGTTCTATTCTTGGAATCAAGTCTCCCAGATATATTCACGGAAAATAGTTGGGTTTCACCGAATACTATGAAAAGAAGTCGTAGTAATGAGGAATCTACCTCAGATGGGGGGTCATTTAGTATGAATAAGGATCCTGCAACTGAAACTAAAGAAGAAAATCATCCAGCACTTTCTCTTACAATGAGTGATGCAGAAGGGACTGTCCCAAACATTGCACGTCCTAATTTAGTTCAACGGGATGCTTTTGACTTGGCCACTCTTGGTGCTGAGATAACAAGAGAGTCCATTCAGACAGATGTTGCCATGGATGAAAAAGTGCAAGACTCACCCTATATGTCTTCCTCATCTTTAGAGTCTCATGCTACCAGCAGCTCTATTGTTGTCTTAGAACCCAATGAGATATCTATCCCTTCAATTGATGCATCCTTTGTTCCATTTTTTCATGGCAGTAATAGGATAGAATTACTACACAAAGGTTTCCCCTTTCAGCTTCTTTGTACTGGTCTGAAAGTAAGGTTTGGCTTTAGCACAAAGTTTGTTGATCAAGCTGGCCTGCCACGGTTTAATTTTGTGGTTTATCCATCACCAAGTTTATGTAAGGTTCTTGATGCATGCGACAATGTTGCACATAAGTTATCCTTGGATTCTGGTAGCAGTTCTGATTGGAGACCTGTTGTTATTAGAAAAGATGGCTTTCTCAACTATCCTACTGTCAGATTGCATATACGTACAGCGCTATTTGGAGACATTTCCATCCATGCCACTGAGATATATAAAAAAGAATCCTCTGGTGCTAATCAACGACTTATCTTCAGCAAGTTCGATGCCGCAGAACTTGGTTCCTTGTTTGTGCCTGGGACATTTGTTGATGCACTCTTCACCTTGGATCCATATGACTATCAGCAGCATGCAGGGATTAAATTAGTTTCCAAAAAACTGTTCATTCATTGA 1494 0.419 MGSIPSEDRSEIVFFDVETTIPTRKGQGYAILEFGAILVCPRKLTELRNYCTLVRPKDLSLISPSSERCNGITAEAVSSAPTFDQIADTVYDLLHGRIWAGHNIIRFDCVRVRDAFGEINKTAPEPKGTIDSLVLLTQKFGRRAGNMKMTTLATYFGLGCQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTENSWVSPNTMKRSRSNEESTSDGGSFSMNKDPATETKEENHPALSLTMSDAEGTVPNIARPNLVQRDAFDLATLGAEITRESIQTDVAMDEKVQDSPYMSSSSLESHATSSSIVVLEPNEISIPSIDASFVPFFHGSNRIELLHKGFPFQLLCTGLKVRFGFSTKFVDQAGLPRFNFVVYPSPSLCKVLDACDNVAHKLSLDSGSSSDWRPVVIRKDGFLNYPTVRLHIRTALFGDISIHATEIYKKESSGANQRLIFSKFDAAELGSLFVPGTFVDALFTLDPYDYQQHAGIKLVSKKLFIH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1900 497 CDD DEDDh 13 177 - -
Lal14g1900 497 SUPERFAMILY Ribonuclease H-like 10 181 IPR012337 -
Lal14g1900 497 PANTHER PROTEIN NEN3 2 497 - -
Lal14g1900 497 SMART exoiiiendus 11 185 IPR013520 -
Lal14g1900 497 Gene3D - 6 182 IPR036397 GO:0003676
Lal14g1900 497 MobiDBLite consensus disorder prediction 201 225 - -
Lal14g1900 497 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 2 497 - -
Lal14g1900 497 MobiDBLite consensus disorder prediction 201 236 - -
Lal14g1900 497 Pfam Exonuclease 13 176 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1900 Lal-Chr14 18390403 18393115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1900 - - ccaj:109808157 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1900 14 18390403 18393115 Lal14g1900 14 18390403 18393115 ECH
Lal14g1900 14 18390403 18393115 Lal7g1378 7 18849153 18853175 LSH