Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1351 ATGTCTGTTTCCATGGCTTCCTCAACCAGTTTTGCCTCTCTGGTATTTATGTTGCTCATCATTGGCTGCACTGCAATCCCTGTGTATCCAATTCATCGACATGTGCAACATGGAAGTAGGAAGCCTCTACAAACATTTCGCCCATATAACATTGCACATCGCGGTTCTAACGGAGAGTTACCTGAAGAAACTGCTCCTGCATACCTGAGAGCTATTGAAGAAGGTGCAGACTTCATTGAAACTGATATCCTATCTTCAAAAGATGGTGTCCTTATATGTTTCCATGATGTTACCCTTGATGATACTACCGATGTTGCAAATCACCAAGAATTTGCAAATCGTAAAAGAACATATGAAGTCCAAGGAGAGAATGTCACTGGCTTTTTTACTGTTGATTTCACATTAAAGGAACTAAAGTCATTGAGGGTGAAGCAGAGATATAACTTTCGGGATCAACAGTATAATGGAAAATTTCAAATCATCACTTTCGAAGAGTACATTTCCATTGCACTGGAAGCACCCAGAGTTGTTGGAATATACCCAGAGATAAAGAACCCTATACTAATCAATCAGCATGTGAAATGGGCAGATGGTAAACTATTTGAGGACAAGTTTGTGGAAACACTTAAGAAATATGGATACAAGGGTTCATACTTGTCAAAAGATTGGTTGAAACAGCCTGCATTTATTCAGTCATTTGCTCCAACTTCACTTGTGTATACATCAAACCAAACAGACTTGCCGAAGATATTGTTAATTGACGATATTACTATTCCAACTCAAGACACAAACCAGTCATATTGGGAAATTACATCTGATAGCTACTTTGAGTACATAAAGGATTATGTTGTGGGAATTGGACCTTGGAAGGAAACAGTGGTAACTGTGGTAAACAATTATTTGCAAACTCCTTCTGATCTTGTTAAAAGGGCACATGCTCATAACCTGCAGGTGCATACATATACGTATCGAAATGAGAACAAATTTTTGTGCTTCAACTTTAATCAAGATCCATATCAAGAGTATGATTATTGGGTGAAGAAGATTGGAGTTGATGGTCTGTTTACAGACTTCACAGGTAGCCTTCATAAATATCAGGAATGGACCTCCTCTAACCGTCACAACGAGAGCGATGACAAGACTGCATCCAGGCTATTGCATAAAATTGCTTCCTTGGTCACCTCTTATTGA 1191 0.3879 MSVSMASSTSFASLVFMLLIIGCTAIPVYPIHRHVQHGSRKPLQTFRPYNIAHRGSNGELPEETAPAYLRAIEEGADFIETDILSSKDGVLICFHDVTLDDTTDVANHQEFANRKRTYEVQGENVTGFFTVDFTLKELKSLRVKQRYNFRDQQYNGKFQIITFEEYISIALEAPRVVGIYPEIKNPILINQHVKWADGKLFEDKFVETLKKYGYKGSYLSKDWLKQPAFIQSFAPTSLVYTSNQTDLPKILLIDDITIPTQDTNQSYWEITSDSYFEYIKDYVVGIGPWKETVVTVVNNYLQTPSDLVKRAHAHNLQVHTYTYRNENKFLCFNFNQDPYQEYDYWVKKIGVDGLFTDFTGSLHKYQEWTSSNRHNESDDKTASRLLHKIASLVTSY 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1351 396 CDD GDPD_ScGlpQ1_like 48 359 - -
Lal7g1351 396 ProSiteProfiles GP-PDE domain profile. 48 366 IPR030395 GO:0006629|GO:0008081
Lal7g1351 396 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6 11 370 - -
Lal7g1351 396 SUPERFAMILY PLC-like phosphodiesterases 48 365 IPR017946 GO:0006629|GO:0008081
Lal7g1351 396 Pfam Glycerophosphoryl diester phosphodiesterase family 53 360 IPR030395 GO:0006629|GO:0008081
Lal7g1351 396 Gene3D Phosphatidylinositol (PI) phosphodiesterase 46 366 IPR017946 GO:0006629|GO:0008081
Lal7g1351 396 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 11 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1351 Lal-Chr7 18684720 18688517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1351 20 370 Acyl Lipid Metabolism Gene Families AT5G08030 77.493 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1351 K01126 - gmx:100778145 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1351 7 18684720 18688517 Lal7g1351 7 18684720 18688517 ECH
Lal14g1885 14 18302980 18305824 Lal7g1351 7 18684720 18688517 LSH