Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1885 ATGGCTTCTTCAACTAGTTTTGCGCCTTTAATATTTCTGTTGCTCATTATTGGGTGCACTGCAAGGCCTTTGTATCCACTTCCTGGACATGTGCATCATGGAAATAGAAAGCCTCTACAAACATTTCGTCCATATAATATTGCACATCGTGGTTCAAATGGAGAGTTTCCTGAAGAATCTGCTCCTGCATACATGAGAGCTATTGAAGAAGGTGCAGACTTCATTGAATCTGATATCTTATCTTCAAAAGATGGTGTCCTTATATGTTTCCATGATGTTACCCTTGATGATACTACTGATGTTGCAAATCACCAAGAGTTTGCAAATCGTAAAAGAACATATGAAGTCCAAGGGGTCAATGTCACTGGCTTTTTTCCTATTGATTTCACATTAGAAGAACTAAAGTCGTTGAGGGTGAAACAGAGATACAACTTCAGGGATCAACAGTATAACGGAAAGTTTCAAATCATCACTTTCGAAGAGTTCATTTCCATTGCACTGAAAGCACCCAGAGTTGTTGGAATATATCCAGAGATAAAGAATCCTGTATTAATCAATCAATATGTGAAATGGGCAGATGGTAAAAGATTTGAGGACAAGTTCATGGAAACACTTAAGAAATATGGATACAAGGGTTCATACTTGTCAAAAGATTGGTTGAAACAGCCTGCATTTGTTCAGTCATTTACCCCAACTTCACTTGTCTATATATCAAACCTAACAGATTTGCCCAAGATATTGTTAATTGACGATATTACTATTCCAACTCAAGATACAAATCAGTCATACTGGGAAATTACATCTGATAGGTACTTTGAGTACATAAAGGAATATGTTGTGGGAATTGGACCTTGGAAGGACACAGTGGTACCTGTTGTAAACAACTATTTGCAAACTCCTACTGATCTTGTTGATAGGGCACATGCTCATAACTTGCAGGTGCATCCATATACATACCGAAATGAGAACCAATTTTTGAGCTTAAACTTTAATCAAGATCCTTATGAAGAGTATGATTATTGGCTGAACAAGATAGGAGTTGATGGTATGTTTACAGACTTCACAGGTAGCCTTCATAGGTATCAAGAATGGATCTCCTCTAACTGTCACAATGAGAGTGATGACAAGACTGCATCCAAGCTATTGCATAAAATTGCTTCATTGGTCTCCTCTTATAAAGGCTAA 1185 0.3738 MASSTSFAPLIFLLLIIGCTARPLYPLPGHVHHGNRKPLQTFRPYNIAHRGSNGEFPEESAPAYMRAIEEGADFIESDILSSKDGVLICFHDVTLDDTTDVANHQEFANRKRTYEVQGVNVTGFFPIDFTLEELKSLRVKQRYNFRDQQYNGKFQIITFEEFISIALKAPRVVGIYPEIKNPVLINQYVKWADGKRFEDKFMETLKKYGYKGSYLSKDWLKQPAFVQSFTPTSLVYISNLTDLPKILLIDDITIPTQDTNQSYWEITSDRYFEYIKEYVVGIGPWKDTVVPVVNNYLQTPTDLVDRAHAHNLQVHPYTYRNENQFLSLNFNQDPYEEYDYWLNKIGVDGMFTDFTGSLHRYQEWISSNCHNESDDKTASKLLHKIASLVSSYKG 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1885 394 SUPERFAMILY PLC-like phosphodiesterases 44 361 IPR017946 GO:0006629|GO:0008081
Lal14g1885 394 CDD GDPD_ScGlpQ1_like 44 355 - -
Lal14g1885 394 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6 9 366 - -
Lal14g1885 394 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 9 366 - -
Lal14g1885 394 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Lal14g1885 394 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 361 IPR017946 GO:0006629|GO:0008081
Lal14g1885 394 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1885 Lal-Chr14 18302980 18305824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1885 16 366 Acyl Lipid Metabolism Gene Families AT5G08030 78.632 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1885 K01126 - gmx:100778145 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1885 14 18302980 18305824 Lal14g1885 14 18302980 18305824 ECH
Lal14g1885 14 18302980 18305824 Lal7g1351 7 18684720 18688517 LSH