Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1346 ATGAGGTGGGAAAAGGTAGAGGTGAAGATGGAGGGTCAAGATGAAAAGGGGCCAGGGAAAAGGTGGGGCCACACATGTAACGCCGTTAAAGGTGGAAGCTTTTTGTATCTCTTTGGAGGTTATGGCAAACATAACTCTCAGACCAACCAAGTTCACGTCTTTGATACTCTCAATCAGACTTGGAGTGAACCCGTGATCAAAGGCTCCCCGCCTACTCCTAGGGACAGCCACACCTGCACAGCCATTGGTGATAATCTATTTGTGTTTGGGGGTACAGATGGGGTTAATCCGCTGAAGGATTTGCACATGCTTGACATTTCTTCACATACATGGATTTCTCCAACCATAAGAGGAGACGGGCCAGAGGCACGTGAAGGTCATAGTGCAGCAGTTGTTGGTAAACGGATATTCATCTTTGGTGGCTGTGGGAAATCTGCAGATAATGATAATGAGGTCTACTACAATGATCTTTACATATTGAATACAGAGACATTTGTTTGGAAGTGTGCTACAACATCAGGCACTCCGCCATCTCCTCGTGATAGCCATAGTTGCTCCTCTTGGAAAAACAAAATTATTGTGATAGGGGGTGAAGATGGGCATGATTATTATTTATCTGACGTCCATATCCTTGACACTGATACACTAATTTGGAGGGAGCTGACTACATCGGGCCAATTGTTGCCACCTCGAGCTGGTCATTCTACAGTTTCTTTTGGCAAGAACTTGTTTGTTTTTGGTGGATTTACAGATGCCCAAAATTTATATAATGACCTTTACATGCTTGATATTGATACTGGTGTTTGGACAAATGTTACAACTATAACCAACAGTCCTTGTGCTAGATTTTCTGTAGCTGGTGACTGTGTAGATCCTATTAAAGGTGGTGTTCTTGTGTTCATCGGTGGTTGTAATAAAAGTCTTGAGGCCCTTGATGACATGTATTACCTATATACAGGGATGACCAGAGAGAGTGGACAGAGGCCAGAGAAGTTGTCTTTGAGAAAGCAGCTGAAGCTGAAATGTCAAGAGCAGAATCTGAATCCTGTGCAAAATGATGTTCTGGTGAGATATGGAGTGAGTGCTGATATGAGACCACCCATGACAGTGCTGAACTGTAGCCAACCAAGTGGACTAAATATCCCAGTAAATCAACCCCTGCCTCCTCCTGGAAAGAAAATGTTTGAAGCCAAGGTGACCAAAAACATCTTTGAGGGATATGCAATTGAAACTGTTATCGATGGAAAGCCTCTTAGAGGAATTCTGTTTTCAAACAAGCCGAGCTCTCTGCCCCCATCTGCTCATACTTCCACCAGGAAAAGGACTGCTGAAATTGGCAGTATAACCCCAAATGGTGCACACACCAACATGTCAAAGACTCCTAAAGTGGATGAATTAAAAAATAGACATGCAGTTCATGGAGACAGTTCAGAATCTCATGAACACCACTGCATTGAAGCTGTTGCTTCTCTTCCATCCAGTAACCCTACAACTGCTGATGCTTCTCTTCCGTCCAGGAACCCTACAACTGCTGATGCTTCTCTTCCATCCTGGAACCCTACAACTGCTGATGTTTCTCTTCCGTCCAGTAACCCTACAACTGATGTTGCTTCTCTTCCGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCAGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCAGTCCAGTAACCCTACAACTGCTGTTGCTTCTCTTCCGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCAGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCCGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCCGTCCAGTAACCCTACAAGTGCTGATGCTTCTCTTCCGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCAGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCCGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCCGTCCAGTAACCCTACAAGTGCTGATGCTTCTCTTCCGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCCGTCCAGTAACCCTACAACTGCTGATGCTTCTCTTCCGTCCAGTAACCCTACAACTGCTGATGCTTCTGTCATTCATAAGGATTCCGTCAACCGAGAACCAGAAGTTGCTTATTTGAATCAAATTGATGGTGGAAAATATGAAACTCCAAAGTTCTTGGGTGGAAACTTGAAAAATGATGGTGCAAATGATGTGGCAAGTTCCACAGGCGATGACAACATCAATGATCAGACAAATGTGTCAATTTCAATGCCTGAAGTTCCAAGGAATGACAATAGAAATGATGCACCAAACTGCAACACTGAATCTTCTAATCCTGTGTCAATTTCAATGCCTGAAGTTCCAAGGCATGACGACAGAAATGATGCACCAAACTGCAACACTGAATCTTCTAATCCTGTCGCAACTGAGAGTGCTGCTTGTCTATCAAATCAAGGTGTGATGATGGATAGCACAAGTGCAAGGACAGAAGAAAACAGTGAAGCAGCAAAGTTGACTTGA 2550 0.4439 MRWEKVEVKMEGQDEKGPGKRWGHTCNAVKGGSFLYLFGGYGKHNSQTNQVHVFDTLNQTWSEPVIKGSPPTPRDSHTCTAIGDNLFVFGGTDGVNPLKDLHMLDISSHTWISPTIRGDGPEAREGHSAAVVGKRIFIFGGCGKSADNDNEVYYNDLYILNTETFVWKCATTSGTPPSPRDSHSCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLIWRELTTSGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTTITNSPCARFSVAGDCVDPIKGGVLVFIGGCNKSLEALDDMYYLYTGMTRESGQRPEKLSLRKQLKLKCQEQNLNPVQNDVLVRYGVSADMRPPMTVLNCSQPSGLNIPVNQPLPPPGKKMFEAKVTKNIFEGYAIETVIDGKPLRGILFSNKPSSLPPSAHTSTRKRTAEIGSITPNGAHTNMSKTPKVDELKNRHAVHGDSSESHEHHCIEAVASLPSSNPTTADASLPSRNPTTADASLPSWNPTTADVSLPSSNPTTDVASLPSSNPTTADASLQSSNPTTADASLQSSNPTTAVASLPSSNPTTADASLQSSNPTTADASLPSSNPTTADASLPSSNPTSADASLPSSNPTTADASLQSSNPTTADASLPSSNPTTADASLPSSNPTSADASLPSSNPTTADASLPSSNPTTADASLPSSNPTTADASVIHKDSVNREPEVAYLNQIDGGKYETPKFLGGNLKNDGANDVASSTGDDNINDQTNVSISMPEVPRNDNRNDAPNCNTESSNPVSISMPEVPRHDDRNDAPNCNTESSNPVATESAACLSNQGVMMDSTSARTEENSEAAKLT 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1346 849 PANTHER KELCH REPEAT DOMAIN 1 443 - -
Lal7g1346 849 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 443 - -
Lal7g1346 849 Pfam Galactose oxidase, central domain 33 82 - -
Lal7g1346 849 Gene3D - 147 378 IPR015915 GO:0005515
Lal7g1346 849 Pfam Kelch motif 121 165 - -
Lal7g1346 849 MobiDBLite consensus disorder prediction 426 458 - -
Lal7g1346 849 MobiDBLite consensus disorder prediction 741 818 - -
Lal7g1346 849 MobiDBLite consensus disorder prediction 491 708 - -
Lal7g1346 849 MobiDBLite consensus disorder prediction 744 793 - -
Lal7g1346 849 MobiDBLite consensus disorder prediction 424 462 - -
Lal7g1346 849 Gene3D - 1 146 IPR015915 GO:0005515
Lal7g1346 849 SUPERFAMILY Galactose oxidase, central domain 15 222 IPR011043 -
Lal7g1346 849 SMART kelc_smart 242 292 IPR006652 GO:0005515
Lal7g1346 849 SMART kelc_smart 191 241 IPR006652 GO:0005515
Lal7g1346 849 SMART kelc_smart 85 134 IPR006652 GO:0005515
Lal7g1346 849 SMART kelc_smart 34 84 IPR006652 GO:0005515
Lal7g1346 849 MobiDBLite consensus disorder prediction 491 711 - -
Lal7g1346 849 Pfam Galactose oxidase, central domain 230 280 - -
Lal7g1346 849 Pfam Galactose oxidase, central domain 179 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1346 Lal-Chr7 18655067 18662210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1346 48 307 Acyl Lipid Metabolism Gene Families AT3G05420 29.151 1.76e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1346 - - gmx:100820222 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1346 7 18655067 18662210 Lal7g1346 7 18655067 18662210 ECH
Lal7g1346 7 18655067 18662210 Lal19g1442 19 17044120 17050333 LSH