Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1338 ATGCGACGGCGGGCTGCCGAGTTTCGGCGCCCGGTTAGACGGAGGTTGTCTTATTGGATCTGGTTGTTCCTTGCTTTGTTCTCTATTCTAGGTTTGCTCTTGTTCTTTCTCCAACATCATCATCACCACCAAGATCCCAATGATTATCCTTCTCTGGAGAGAAATGCAAGAGTTGACCATTTTGCTAGGGAGAGTTTGAACTTCACTGAAGAAATTACGAGTGTAAAATCATTTTCCCGGCAGTTAGCTGAACAAATGACTCTGGCAAAGGCTTATGTGGTCATTGCTAAAGAGCACAATAATCTTCATCTAGCTTGGCAGCTTAGTAAAAAGATAAGAGGATGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGTGAGCCTGTCACACAGGAGGAAGCGGAGCCAATCATTAAAAGCCTCTCTTCTCTAATTTTTAAGGCACAAGATATCCATTATGATATTGCAACTACAATAGTGACTATGAAATCGCATGTTCAAGCTCTTGAAGAGCGTGCCAATGCAGCAACAGTTCAAAGCACTGTGTTTGGTCAAGTAGCAGCTGAAGCATTGCCCAAGAGTCTTCATTGCCTAAACATAAAACTTATGACTGATTGGCTTAAGAAGCCATCCCTGAAAGAACTCTCATACGAGATGAAAAACTCCCCACGGCTCATGGACAATAATCTATATCATTTCTGCATATTTTCTGATAATGTACTGGCGACATCTGTAGTTGTTAACTCAACTGTATCCACTGCTGACCATCCAAAACAGTTGGTCTTCCACATTGTCACCAATGGAGTCAATTATGGAGCAATGCAAGCATGGTTTCTCAGTAATGACTTTAAAGGGGCCACGATAGAGGTGCAAAATATTGACGAGTTTCATTGGTTGAATGCTTCTTACTCTCCACTTGTCAAGCAGCTTCTCAATCCAGACTCACGATCCTTCTATTTCGGGGTATATCAAGATTTAAATGTTGAACCAAAAATGCGGAATCCCAAGCATTTGTCTTTATTGAATCATCTTCGGTTTTACATCCCTGAGATTTATCCGCAACTTGAGAAGGTTATTTTCCTTGATGATGATCTTGTTGTCCAGAAGGACCTTACGCCTCTTTTCTCACTGGATTTGCATGGAAATGTGAATGGTGCAGTTGAAACCTGTCTTGAAGCGTTCCACCGGTACTACAAGTATCTCAACTTCTCAAATTCAATTATAAGTTCAAAGTTTGATCCGCAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGATTTGGTTGCATGGAGGAAAGCAAACGTGACCACAAAATATCACTATTGGCAAGAGCAGAATGCTGATGGGACACTTTGGAAGCTGGGGACACTTCCTCCAGCTCTTCTATCTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTATTAGGATTGGGTTATGACTTGAATATTGACAACCGCCTGATCGAAAGTGCAGCAGTTGTTCACTTCAACGGGAACATGAAACCGTGGCTGAAGTTAGCTATAGGCAGGTATAAGCCACTATGGGACAGATACATAAATCAAAGTCATCCTTATCTTCAAGATTGTGTCACAAGTTGA 1611 0.4184 MRRRAAEFRRPVRRRLSYWIWLFLALFSILGLLLFFLQHHHHHQDPNDYPSLERNARVDHFARESLNFTEEITSVKSFSRQLAEQMTLAKAYVVIAKEHNNLHLAWQLSKKIRGCQLLLSKAAMTGEPVTQEEAEPIIKSLSSLIFKAQDIHYDIATTIVTMKSHVQALEERANAATVQSTVFGQVAAEALPKSLHCLNIKLMTDWLKKPSLKELSYEMKNSPRLMDNNLYHFCIFSDNVLATSVVVNSTVSTADHPKQLVFHIVTNGVNYGAMQAWFLSNDFKGATIEVQNIDEFHWLNASYSPLVKQLLNPDSRSFYFGVYQDLNVEPKMRNPKHLSLLNHLRFYIPEIYPQLEKVIFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACAWAFGMNIFDLVAWRKANVTTKYHYWQEQNADGTLWKLGTLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVVHFNGNMKPWLKLAIGRYKPLWDRYINQSHPYLQDCVTS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1338 536 CDD GT8_like_1 231 524 - -
Lal7g1338 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 233 531 IPR029044 -
Lal7g1338 536 PANTHER HEXOSYLTRANSFERASE 3 536 - -
Lal7g1338 536 Pfam Glycosyl transferase family 8 235 510 IPR002495 GO:0016757
Lal7g1338 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 536 IPR029993 GO:0047262
Lal7g1338 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 534 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1338 Lal-Chr7 18583945 18587479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1338 1 533 Glycosyltransferase AT2G20810 54.731 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1338 K13648 - gmx:100798878 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1338 7 18583945 18587479 Lal7g1338 7 18583945 18587479 ECH
Lal7g1338 7 18583945 18587479 Lal19g1436 19 17010755 17014714 LSH