Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1436 ATGCGGCGGCGGGCTGCCGAGTATCGGCGCCCGGTTAGACGGAGGGTATCATATTGGATCTGGTTATTCATTGCCTTGTTCTCTATTCTCGGCTTGCTCGTGTTCCTTCTTCAAAATCATCATTACCATGATCCCGATGATTTTCCTTCCTTGGAGAAAAATGCAAGAGTTGAACATTTTGCTAGGGAGAGTTTGAATTTTACTGAAGAAATTACGAGTGTAAAATCATTTTCTCGGCAGTTAGCCGAACAAATGACTCTGGCGAAGGCTTATGTGGTCATTGCTAAAGAGCACAATAATCTTCATCTAGCCTGGCAGCTTAGCAAAAAGATAAGAGGATGCCAGCTTTTGCTTTCAAAAACTGCCATGACTGGGGAGCCTGTCACACAGGAGGAAGCGGAGCTGATCATTAAAAGTCTTTCTTCTCTAATATTTAAGGCACAAGATATCCATTATGACATTGCGACCACAATAGTGACTATGAAGTCGCATATTCAAGCTCTTGAAGAGCGTGCCAATGCAGCAACAGTTCAAAGCACTGTGTTTGGTCAGGTAGCAGCTGAAGCATTACCCAAGAGTCTTCATTGCCTAATCGTAAAACTTATGACTGATTGGCTTAAGAAGCCATCCCTGAAAGAACTCTCATATGAGAACAAAAACTCCCTGCGGCTCGTGGACAATAATCTATATCATTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCCAGTGCTGACCATCCAAAGCAGTTGGTCTTTCACATTGTCACCGATGGAGTCAATTATGGAGCAATGCAAGCATGGTTCCTCAGTAATGACTTTAAAGGGGCCACCATAGAGGTGCAGAATATTGATGAGTTTCGTTGGTTGAATGCATCTTATTCTCCAATTGTCAAGCAGCTCCTCAATCCAGACTCACGGGCTTTCTATTTTGGGGTATATCAAGATGCTAGTGTTCAACCGAAAATCCGGAATCCCAAGTATTTGTCTTTGCTGAATCATCTTCGGTTTTACATCCCTGAGATTTATCCGCAACTTGAGAAGGTTGTTTTCCTGGATGATGATACTGTTGTCCAGAAGGACCTGACGCCACTTTTCTCATTGGATTTGCATGGAAATGTGAATGGCGCTGTTGAGACCTGTCTTGAAGCGTTCCATCGGTACTACAAGTATCTAAACTTCTCAAATCCAATTATAAGCTCAAAGTTTGATCCACAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCAAATGTGACCGCAAGATATCACTATTGGCAAGAGCAGAATGCTGATGGGACACTTTGGAAGCTGGGGACACTTCCTCCTGCTCTTCTATGCTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGCTTTAGGACTGGGTTATGACCTCAATATTGACAACCGCCTGATCGAAAGTGCGGCAGTTGTACACTTCAACGGGAACATGAAGCCGTGGCTGAAGTTAGCTATTGGCAGGTATAAGCCCCTATGGGACAGATACATAAATCAAAGTCACCCTTATCTTCAAGATTGTGTCACAAGTTGA 1608 0.4328 MRRRAAEYRRPVRRRVSYWIWLFIALFSILGLLVFLLQNHHYHDPDDFPSLEKNARVEHFARESLNFTEEITSVKSFSRQLAEQMTLAKAYVVIAKEHNNLHLAWQLSKKIRGCQLLLSKTAMTGEPVTQEEAELIIKSLSSLIFKAQDIHYDIATTIVTMKSHIQALEERANAATVQSTVFGQVAAEALPKSLHCLIVKLMTDWLKKPSLKELSYENKNSLRLVDNNLYHFCIFSDNVLATSVVVNSTVSSADHPKQLVFHIVTDGVNYGAMQAWFLSNDFKGATIEVQNIDEFRWLNASYSPIVKQLLNPDSRAFYFGVYQDASVQPKIRNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDTVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPIISSKFDPQACAWAFGMNIFDLVAWRKANVTARYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHALGLGYDLNIDNRLIESAAVVHFNGNMKPWLKLAIGRYKPLWDRYINQSHPYLQDCVTS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1436 535 CDD GT8_like_1 230 523 - -
Lal19g1436 535 Pfam Glycosyl transferase family 8 234 509 IPR002495 GO:0016757
Lal19g1436 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 531 IPR029044 -
Lal19g1436 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 535 IPR029993 GO:0047262
Lal19g1436 535 PANTHER HEXOSYLTRANSFERASE 3 535 - -
Lal19g1436 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 533 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1436 Lal-Chr19 17010755 17014714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1436 1 532 Glycosyltransferase AT2G20810 53.818 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1436 K13648 - gmx:100805886 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1436 19 17010755 17014714 Lal19g1436 19 17010755 17014714 ECH
Lal7g1338 7 18583945 18587479 Lal19g1436 19 17010755 17014714 LSH