Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1290 ATGAATAATGCAAGACCAGATACACCCCTGATGCCACCATCATGGCGGAATCTCCCCGACTTCAAAAAATCGGTTAAATTGAAGTACGTGAAGCTTGGCTATCATTACCTCATCACCCATGGAATGTACCTCTTTCTTTCCCCCCTTGTGGTTCTGATTTTTGCTCATCTCTCCACCTTCGCCCTCCAAGACATTTATGATCTCTGGGAGCATCTACAATACAATTTGGTATCTGTTATTCTTTGTTCAGCTCTCCTTGTTTTTTTATCCACCCTCTATTTTCTCACTCGTCCTCGACCAGTGTACCTTGTCAATTTCTCCTGTTACAAGCCTGAAGAATCTCACAAATGCACAAAAAAGATATTTATGGATCATTCAAGGATGGCTGGTTCTTTCAGTGATGAAAATCTTGAATTCCAGAAAAAGATCCTTGAGAGATCTGGCCTTGGGGACTCTACTTACCTTCCAGAGGCTGTCCTCAACATTCCTCCAAACCCTTCGATCAAAGAAGCTAGAAAAGAAGCCGAGGCTGTCATGTTTGGTGCCATTGATGAGTTATTTTCTAAGACCTTTGTTAACCCTAAAGACATCGGAATTCTGATTGTGAATTGCAGCCTATTCAATCCAACTCCATCACTGTCTGCAATGATTGTCAATCACTACAAACTTCGAGGGAATATAAGTAGCTACAATCTAGGTGGGATGGGTTGCAGTGCCGGGTTGATCTCAATTGATCTTGCTAAAGATCTACTCCAAGCTCATCCCAACTCGTACGCATTGATCATCAGCATGGAGAATATCACACTGAATTGGTATTTTGGAAATGACCGGTCAAAGCTTGTTTCAAACTGTTTATTTCGTATGGGGGGAGCTGCAATTCTGCTTTCCAACAAAAGCTGTGACAAAAGAAGATCCAAATACCGTTTGGTCACCACCGTTCGCACTAATAAGGCTGCTGATGACAAGTGTTTTAGTTGTGTTACTCAAGAAGAAGATGCCAATGGCAAGATCGGTGTTACTTTGTCGAAAGATCTCATGGCAGTTGCAGGTGATGCTTTAAAAACCAACATTACCACACTTGGGCCTCTCGTACTCCCAACATCAGAACAGCTGCTATTCTTTGCCACTTTAATTGGGAAGAAACTTTTCAAGATGAAGATCAAACCTTATATTCCAGATTACAAGCTTGCTTTTGAACATTTTTGCATCCATGCTGGAGGAAGAGCTGTTTTGGATGAATTAGAGAAGAACTTGCAGCTATCTTCTTGGCATATGGAGCCATCAAGGATGACACTTTATCGATTCGGAAACACCTCCAGCAGTTCACTTTGGTATGAATTGGCTTACACAGAAGCCAAAGGGAGGATCAAGAAGGGGGATAGAATGTGGCAAATAGCATTTGGTTCTGGATTCAAGTGTAATAGTGCAGTGTGGAAAGCTCTCAAGACCATCAACGTGGCTAAGGAGAAGAATCCTTGGATGGACGAAATCCACCAGTTCCCTGTTGAAGTCCCAAGGGTGTTTGCAATATAA 1533 0.4227 MNNARPDTPLMPPSWRNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVLIFAHLSTFALQDIYDLWEHLQYNLVSVILCSALLVFLSTLYFLTRPRPVYLVNFSCYKPEESHKCTKKIFMDHSRMAGSFSDENLEFQKKILERSGLGDSTYLPEAVLNIPPNPSIKEARKEAEAVMFGAIDELFSKTFVNPKDIGILIVNCSLFNPTPSLSAMIVNHYKLRGNISSYNLGGMGCSAGLISIDLAKDLLQAHPNSYALIISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNKSCDKRRSKYRLVTTVRTNKAADDKCFSCVTQEEDANGKIGVTLSKDLMAVAGDALKTNITTLGPLVLPTSEQLLFFATLIGKKLFKMKIKPYIPDYKLAFEHFCIHAGGRAVLDELEKNLQLSSWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIKKGDRMWQIAFGSGFKCNSAVWKALKTINVAKEKNPWMDEIHQFPVEVPRVFAI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1290 510 CDD CHS_like 83 478 - -
Lal7g1290 510 SUPERFAMILY Thiolase-like 87 304 IPR016039 GO:0016746
Lal7g1290 510 Gene3D - 104 480 IPR016039 GO:0016746
Lal7g1290 510 PANTHER 3-KETOACYL-COA SYNTHASE 4 508 - -
Lal7g1290 510 PANTHER 3-KETOACYL-COA SYNTHASE 4 508 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lal7g1290 510 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 399 479 IPR013747 -
Lal7g1290 510 PIRSF Very_long_ch_3-ktacl-CoA_syn 20 510 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lal7g1290 510 SUPERFAMILY Thiolase-like 286 481 IPR016039 GO:0016746
Lal7g1290 510 Pfam FAE1/Type III polyketide synthase-like protein 93 382 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1290 Lal-Chr7 18267577 18269109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1290 9 510 Miscellaneous Gene Families AT2G26640 83.466 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1290 K15397 - gmx:100817884 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1290 7 18267577 18269109 Lal7g1290 7 18267577 18269109 ECH
Lal14g1851 14 18080334 18081866 Lal7g1290 7 18267577 18269109 LSH
Lal7g1290 7 18267577 18269109 Lal21g1022 21 11927329 11930426 PCT