Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1022 ATGTTTGGGAGGGAAATGGTAGAGGTAAAATCAGATACACCCTTGTTGCCACCATCATCGCGGAACCTTCCTGATTTAAGGAAGTCTATTAAACTGAAGTATGTAAAACTTGGTTATCATTACCTGATAACACATGGGATGTATCTCTCTCTTTCCCCCATTGTGGTGCTCATTTCTGCTAAGCTTTCCACTTTCTCCCTCAATGATGTGTATGATATTTGGGAGCATCTTCAGTATAACTTGATATCTGTTATTCTTTGCTCAACATTCATGGTATTTTTATCCACCCTATACTTTGTGACTCGTCCTCGACCAGTGTACCTAGTTGATTTCTCATGTTACAAGCCTGAAGAAGCTCGTAAATGCACAAAAAAGATGTTTATGGATCAATCTCGCGTGACTGGTTATTTCACAGAGCAAAATGTTGAATTCCAGCAAAAAATCCTAGAGAGATCTGGGCTTGGGGATAACACTTATCTTCCTGAGGCTATCCTCAATATTCCTCCCAATCCTTCAATGAAAGAAGCAAGGAAAGAAGCTGAAATTGTAATGTTTAGCGCAATTGATGAGCTATTTTCCAAGACTTGTGCAAAGCCTAAAGACATTGGAATTCTTATTGTGAATTGTAGCCTGTTCAACCCAACGCCATCGCTTTCAGCGATGATCATCAATCACTATAAGCTTCGAGGGAATATAAAGAGCTACAATCTAGGTGGTATGGGATGCAGTGCAGGGCTGATCTCAATTGCTCTTGCTAAAGATCTTCTCCAGGTCCATCCCAATTCCTATGCATTAGTCATTAGCATGGAGAATATCACGCTAAATTGGTACGAAGGAAATGATCGATCAAAGCTAGTTTCAAATTGTTTATTCCGTATGGGAGGAGCTGCAATTCTGCTTTCAAACAAAAGCTCTGACAGAAGAAGATCCAAATACCGATTAGTCCATAATGTTCGCACAAATAAGGCTGCAGATGACAAGTGCTTCAGCTGTGTTACCCAAGAAGAAGATGCCGATGGAAAGGTTGGTGTTACTTTGTCAAAAGATCTAATGGCAGTTGCAGGTGATGCTCTAAAAACTAATATCACTACACTAGGGCCTCTTGTCCTTCCAACATCCGAGCAACTATTATTCTTCGGCACATTAATTGGAAAGAAACTTTTCAAGATGAAGATCAAACCTTATATTCCAGATTTCAAGCTAGCTTTTGAACATTTTTGTATCCATGCTGGAGGAAGAGCTGTTTTGGATGAAATAGAGAAGAACTTGCAGTTGTCTCCATGGCATATGGAGCCATCAAGAATGACACTTTATCGATTCGGGAACACCTCCAGCAGTTCACTTTGGTATGAGTTGGCTTACTCAGAAGCCAAGGGACGCGTCAAAAAGGGGGATAGAACATGGCAAATTGCATTTGGTTCTGGATTCAAGTGCAACAGTGCTGTATGGAAGGCTCTCAGGACCATCAATCCTGCTAAGGAAAAAAGCCCTTGGATGGATGAGATCCACAAATTTCCCATTGATGTTCCAAGGGTTTCGGCAATCTAA 1548 0.4089 MFGREMVEVKSDTPLLPPSSRNLPDLRKSIKLKYVKLGYHYLITHGMYLSLSPIVVLISAKLSTFSLNDVYDIWEHLQYNLISVILCSTFMVFLSTLYFVTRPRPVYLVDFSCYKPEEARKCTKKMFMDQSRVTGYFTEQNVEFQQKILERSGLGDNTYLPEAILNIPPNPSMKEARKEAEIVMFSAIDELFSKTCAKPKDIGILIVNCSLFNPTPSLSAMIINHYKLRGNIKSYNLGGMGCSAGLISIALAKDLLQVHPNSYALVISMENITLNWYEGNDRSKLVSNCLFRMGGAAILLSNKSSDRRRSKYRLVHNVRTNKAADDKCFSCVTQEEDADGKVGVTLSKDLMAVAGDALKTNITTLGPLVLPTSEQLLFFGTLIGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLQLSPWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRVKKGDRTWQIAFGSGFKCNSAVWKALRTINPAKEKSPWMDEIHKFPIDVPRVSAI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1022 515 Pfam FAE1/Type III polyketide synthase-like protein 98 387 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lal21g1022 515 Gene3D - 109 485 IPR016039 GO:0016746
Lal21g1022 515 SUPERFAMILY Thiolase-like 291 487 IPR016039 GO:0016746
Lal21g1022 515 PANTHER 3-KETOACYL-COA SYNTHASE 9 514 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lal21g1022 515 CDD CHS_like 88 483 - -
Lal21g1022 515 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 404 484 IPR013747 -
Lal21g1022 515 SUPERFAMILY Thiolase-like 92 310 IPR016039 GO:0016746
Lal21g1022 515 PIRSF Very_long_ch_3-ktacl-CoA_syn 25 515 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lal21g1022 515 PANTHER 3-KETOACYL-COA SYNTHASE 9 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1022 Lal-Chr21 11927329 11930426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1022 7 515 Miscellaneous Gene Families AT2G26640 79.371 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1022 K15397 - gmx:100817884 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1022 21 11927329 11930426 Lal21g1022 21 11927329 11930426 ECH
Lal14g1851 14 18080334 18081866 Lal21g1022 21 11927329 11930426 PCT
Lal7g1290 7 18267577 18269109 Lal21g1022 21 11927329 11930426 PCT