Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1154 ATGGGTAAGTGCAGTAACAACTTGGTCGGAATACTGAATTTCGTGACAACCCTTCTCTCCATTCCAATTATTATCGCCGGCATTTGGCTGAGCAAACAAGCCGGCACCGAATGCGAACGGTGGCTTGAAAAACCCGTAATCGCCGTGGGCGTGTTCCTATTGGTTGTTTCAATCGCGGGTCTAATCGGCGCGTGTTACCGTGTGACATGGCTCCTATGGGTTTACCTATTGGTTATGTTCTTGTTGATAGTGCTTCTCTTTGCGTTCACCGTGTTTGCATTCGTTGTAACGAACAAAGGTGCTGGTGAAGCACTTTCTGGTAAGGGGTATAGGGAGTATAGGCTTGGTGATTATTCGAACTGGTTGCAGAAAAGAGTTGATGGAAGCACATGGGATAGGATCAGTAGTTGTTTGCAGGCTGGTAAACTCTGCTCCAGATTCGGAGACCAATATGTTCATGATACTGTTGATAAGTTCTATAGTGAGGAATTGTCACCTCTTCAGTCTGGATGCTGCAAGCCTTCAAATGAGTGTGGTTTCACCTATAAGGGTCCAACTAACTGGGTTCGCGCCGGAAACGCTACTCATAGCAACCCGGATTGTAATGCCTGGAATAATGATCCAAACATGCTGTGCTACAATTGCCAATCCTGCAAGGCTGGCATGCTGGAAAACATTAAGACAGACTGGAAGAAAGTGGCTATTGTCAATGTTGTATTCCTCATCTTCCTGATTATTGTCTACTCCATTGGTTGCTGTGCATTCAGGAATAACAGGATGGAAAATCATTATCCCAAATACTAG 804 0.4515 MGKCSNNLVGILNFVTTLLSIPIIIAGIWLSKQAGTECERWLEKPVIAVGVFLLVVSIAGLIGACYRVTWLLWVYLLVMFLLIVLLFAFTVFAFVVTNKGAGEALSGKGYREYRLGDYSNWLQKRVDGSTWDRISSCLQAGKLCSRFGDQYVHDTVDKFYSEELSPLQSGCCKPSNECGFTYKGPTNWVRAGNATHSNPDCNAWNNDPNMLCYNCQSCKAGMLENIKTDWKKVAIVNVVFLIFLIIVYSIGCCAFRNNRMENHYPKY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1154 267 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Lal7g1154 267 PRINTS Transmembrane four family signature 7 30 - -
Lal7g1154 267 PRINTS Transmembrane four family signature 39 65 - -
Lal7g1154 267 PRINTS Transmembrane four family signature 66 94 - -
Lal7g1154 267 Pfam Tetraspanin family 7 254 IPR018499 GO:0016021
Lal7g1154 267 PANTHER TETRASPANIN-8 3 264 - -
Lal7g1154 267 PANTHER TETRASPANIN-8-RELATED 3 264 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1154 Lal-Chr7 17395044 17397301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1154 1 266 Miscellaneous Gene Families AT2G23810 65.918 8.59e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1154 - - gmx:100819507 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1154 7 17395044 17397301 Lal7g1154 7 17395044 17397301 ECH
Lal7g1154 7 17395044 17397301 Lal19g1296 19 16044117 16049321 LSH
Lal14g1873 14 18203715 18207071 Lal7g1154 7 17395044 17397301 LSH