Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1091 ATGATGTATGAACAGCAACAGTTTCAGCAGCCTATGCTGAAGATGGATATGAGGAAGAAAACGGAGAGAATATCAAAATCCATAGAAGAAGAGAAGCTTGAAATGTTGGATCTTAGTGGTATGTCCTTGGAGTCCCTTCCAAGTCCTTCTATCAACTTAGCTACCATTTGCAAGTTGGATCTCTCTAATAACAATCTTCAGAACATTCCGGAGTCCTTAACAACCAGATTGCTGAACTTGATGGTTTTGGACGTACACTCCAACCAGCTTAGGTCTCTTCCCAATTCCATTGGATGCCTCTCTAAGCTCAAGATTTTGAATGTATCTGGCAACCTTATGGAATACCTTCCTAAAACAATTGAGAATTGCAGAGCTTTAGAAGAACTGAATGCCAACTTCAACAAGTTAAGCCAGCTCCCAGACACCATTGGTTTTGAGCTCATAAACCTAAAGAAGCTATCAGTGAACTCCAACAAGCTCCTTTTCCTTCCTCGCACCACCTCACACCTAACCGCACTTAAAGTCTTAGACGCGCGTCTCAATTGCCTAAGATCTCTCCCAGAGGACCTTGAGAACCTCATCAACCTTGAAACCCTAAACGTGAGCCAGAACTTTCAATACCTGGATTCTCTACCCTACTCCATAGGCCTTCTCTTATCCCTTGTTGAGCTCGACCTTAGTTACAACAAGATCAAGTCATTGCCTGATTCCATTGGGTGCCTGAAGAGGCTTCAGAAGCTAAGTGTTGAAGGTAACCCTCTCACTTCGCCACCGCCACTTGTGGTGGAGCAGGGATTGCATGCAGTGAAGGAGTACCTGTGTCAGAAGATGAATGCTGGGCATCAAAGCCCAACTAAGAAGAAATCATGGGTGGGGAAGTTGGTTAAGTATGGTACGTTTAATGGAAATGTCAGAAGTGGTGCTCGTGAAAGAGATCAAGAACGTGAAGCTTTCATCATGCCTGAGTATAGAACTATGGATGGTCTTGCTTCACCACGCTATATGGCCATGTTTTCACGTCGTCGGCTATTTTCACCTCGTACTTATTTCAGCAATTGA 1059 0.44 MMYEQQQFQQPMLKMDMRKKTERISKSIEEEKLEMLDLSGMSLESLPSPSINLATICKLDLSNNNLQNIPESLTTRLLNLMVLDVHSNQLRSLPNSIGCLSKLKILNVSGNLMEYLPKTIENCRALEELNANFNKLSQLPDTIGFELINLKKLSVNSNKLLFLPRTTSHLTALKVLDARLNCLRSLPEDLENLINLETLNVSQNFQYLDSLPYSIGLLLSLVELDLSYNKIKSLPDSIGCLKRLQKLSVEGNPLTSPPPLVVEQGLHAVKEYLCQKMNAGHQSPTKKKSWVGKLVKYGTFNGNVRSGARERDQEREAFIMPEYRTMDGLASPRYMAMFSRRRLFSPRTYFSN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1091 352 ProSiteProfiles Leucine-rich repeat profile. 55 76 IPR001611 GO:0005515
Lal7g1091 352 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 5 345 - -
Lal7g1091 352 SUPERFAMILY L domain-like 32 263 - -
Lal7g1091 352 Pfam Leucine rich repeat 58 112 IPR001611 GO:0005515
Lal7g1091 352 Pfam Leucine rich repeat 218 254 IPR001611 GO:0005515
Lal7g1091 352 SMART LRR_bac_2 218 237 - -
Lal7g1091 352 SMART LRR_bac_2 123 142 - -
Lal7g1091 352 SMART LRR_bac_2 53 72 - -
Lal7g1091 352 SMART LRR_bac_2 147 166 - -
Lal7g1091 352 SMART LRR_bac_2 77 96 - -
Lal7g1091 352 SMART LRR_bac_2 170 189 - -
Lal7g1091 352 SMART LRR_bac_2 241 260 - -
Lal7g1091 352 SMART LRR_bac_2 100 119 - -
Lal7g1091 352 Gene3D Ribonuclease Inhibitor 2 141 IPR032675 -
Lal7g1091 352 Gene3D Ribonuclease Inhibitor 142 275 IPR032675 -
Lal7g1091 352 ProSiteProfiles Leucine-rich repeat profile. 79 100 IPR001611 GO:0005515
Lal7g1091 352 ProSiteProfiles Leucine-rich repeat profile. 220 241 IPR001611 GO:0005515
Lal7g1091 352 PRINTS Leucine-rich repeat signature 56 69 - -
Lal7g1091 352 PRINTS Leucine-rich repeat signature 218 231 - -
Lal7g1091 352 PANTHER LEUCINE-RICH REPEAT-CONTAINING 5 345 - -
Lal7g1091 352 SMART LRR_typ_2 218 240 IPR003591 -
Lal7g1091 352 SMART LRR_typ_2 100 123 IPR003591 -
Lal7g1091 352 SMART LRR_typ_2 170 193 IPR003591 -
Lal7g1091 352 SMART LRR_typ_2 53 76 IPR003591 -
Lal7g1091 352 SMART LRR_typ_2 77 99 IPR003591 -
Lal7g1091 352 SMART LRR_typ_2 124 146 IPR003591 -
Lal7g1091 352 SMART LRR_typ_2 147 169 IPR003591 -
Lal7g1091 352 SMART LRR_typ_2 241 264 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1091 Lal-Chr7 16885173 16889268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1091 53 262 Receptor kinase-like Gene Family AT2G15080 32.877 1.53e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1091 - - gmx:100783239 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1091 7 16885173 16889268 Lal7g1091 7 16885173 16889268 ECH
Lal14g1685 14 17027651 17037016 Lal7g1091 7 16885173 16889268 LSH
Lal7g1091 7 16885173 16889268 Lal21g1218 21 15197911 15201582 PCT
Lal21g1218 21 15197911 15201582 Lal7g1091 7 16885173 16889268 PCT