Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1218 ATGAAAGGAGATATGAGGAGAAAGTTAGAGAAAATCAAATCCTTTGATGAAGAAAGGCTTCAAATAATGAATTTGAGTAACATGTCATTGGAATCTCTTCCCAAATTTTCTATTGATTTAGCTATTATTTGCAACTTGGATCTCTCTAATAATAATCTCCAGAACATTCCAGAGTCATTAACAGCAAGATTACTGAACTTGTTGGTGTTGGATTTGCACTCGAACCAGATCAGGTCTATACCCAATTCTATTGGCTGTCTCTCTAAGCTGAAGGTTTTGAATGTTTCTGCCAACTTCATTGAATCACTCCCCAAAACCATTGAAAATTGCAGAGCCTTAGAAGAATTGAATTGCAACTTCAACAAGCTGAGCAAGCTCCCAGACACAATAGGGTTTGAGCTCATAAACCTCAAGAAGCTTTCAATCAATTCCAACAAGCTTATGTTCCTTCCAAGTTCCATCTCTAACCTCACCTATCTGAAGATTCTCGACGCGCGCCTAAACTGCCTTCGATCTCTCCCGGAAGACCTTGAGAACCTCATCAATCTTGAGGCCTTGAATGTGAGTCAAAATTTCCAATACTTGGAGTCTCTACCCTACTCTATAGGACTCCTTTTGTCCCTTGTTGAATTGGATGTTAGCTACAACAATATAAGGACCTTGCCTAATTCCATTGGGTGCTCCAAGAAGCTTCAAAAGTTAAGTGTGGAAGGAAATCCACTCATTTCACCTCCATTGGGGGTGGTGAAGCAAGGGTTACATGTAGTGAAGGAGTACTTATGTCGGAAGATTAACTCGAGCCACGAAAACAATCACAAGAATAGGTCATGGGTAAGGAAGCTTGTGAAGTGTGAGACACTCAACCGATATATGAGAAGGAAACAACCACAACATGAGGATGATGATTTCGACTTGGATCAATATAACTCCATCAATTGTCTTTCTACACAATCACCGGATTTCTTGGGTATGTTTTCACCTCAGCGCCTCTTCTCGCGCCGTCGTTCCTCCTCTTTCGGTTAA 1023 0.4086 MKGDMRRKLEKIKSFDEERLQIMNLSNMSLESLPKFSIDLAIICNLDLSNNNLQNIPESLTARLLNLLVLDLHSNQIRSIPNSIGCLSKLKVLNVSANFIESLPKTIENCRALEELNCNFNKLSKLPDTIGFELINLKKLSINSNKLMFLPSSISNLTYLKILDARLNCLRSLPEDLENLINLEALNVSQNFQYLESLPYSIGLLLSLVELDVSYNNIRTLPNSIGCSKKLQKLSVEGNPLISPPLGVVKQGLHVVKEYLCRKINSSHENNHKNRSWVRKLVKCETLNRYMRRKQPQHEDDDFDLDQYNSINCLSTQSPDFLGMFSPQRLFSRRRSSSFG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1218 340 SMART LRR_sd22_2 134 159 - -
Lal21g1218 340 SMART LRR_sd22_2 87 118 - -
Lal21g1218 340 SMART LRR_sd22_2 205 236 - -
Lal21g1218 340 SMART LRR_sd22_2 64 85 - -
Lal21g1218 340 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 5 322 - -
Lal21g1218 340 ProSiteProfiles Leucine-rich repeat profile. 207 228 IPR001611 GO:0005515
Lal21g1218 340 SMART LRR_bac_2 157 176 - -
Lal21g1218 340 SMART LRR_bac_2 205 224 - -
Lal21g1218 340 SMART LRR_bac_2 180 201 - -
Lal21g1218 340 SMART LRR_bac_2 40 59 - -
Lal21g1218 340 SMART LRR_bac_2 17 36 - -
Lal21g1218 340 SMART LRR_bac_2 228 246 - -
Lal21g1218 340 SMART LRR_bac_2 87 106 - -
Lal21g1218 340 SMART LRR_bac_2 134 153 - -
Lal21g1218 340 SMART LRR_bac_2 110 129 - -
Lal21g1218 340 PANTHER LEUCINE-RICH REPEAT-CONTAINING 5 322 - -
Lal21g1218 340 Pfam Leucine rich repeat 45 98 IPR001611 GO:0005515
Lal21g1218 340 ProSiteProfiles Leucine-rich repeat profile. 66 87 IPR001611 GO:0005515
Lal21g1218 340 Gene3D Ribonuclease Inhibitor 132 246 IPR032675 -
Lal21g1218 340 SMART LRR_typ_2 40 63 IPR003591 -
Lal21g1218 340 SMART LRR_typ_2 111 133 IPR003591 -
Lal21g1218 340 SMART LRR_typ_2 87 110 IPR003591 -
Lal21g1218 340 SMART LRR_typ_2 157 180 IPR003591 -
Lal21g1218 340 SMART LRR_typ_2 64 86 IPR003591 -
Lal21g1218 340 SMART LRR_typ_2 134 156 IPR003591 -
Lal21g1218 340 SMART LRR_typ_2 205 228 IPR003591 -
Lal21g1218 340 SUPERFAMILY L domain-like 19 246 - -
Lal21g1218 340 Gene3D Ribonuclease Inhibitor 3 131 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1218 Lal-Chr21 15197911 15201582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1218 26 241 Receptor kinase-like Gene Family AT2G15080 35.268 3.31e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1218 - - gmx:100775711 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1218 21 15197911 15201582 Lal21g1218 21 15197911 15201582 ECH
Lal14g1685 14 17027651 17037016 Lal21g1218 21 15197911 15201582 PCT
Lal7g1091 7 16885173 16889268 Lal21g1218 21 15197911 15201582 PCT
Lal21g1218 21 15197911 15201582 Lal14g1685 14 17027651 17037016 PCT
Lal21g1218 21 15197911 15201582 Lal7g1091 7 16885173 16889268 PCT