Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1034 ATGGAAGAGGTTGGAGGGTCAAAATTGAAAGCACTTGGGCAAATTACAAGGCTAAAAGAAATGTTTCAGAAATGGCAAACTACTCCACTAGGCTCAAAAGAAACCAATGACCACTGTCATAATGTGAATCATGGAGGAATATCACCAATGATTAACAAAAGACTAACAAATCTTGTGTATTGTGACTCTGATGAGGAAAGTTGCTACAGCCCCGAACCGCCACATGATGTTCCTAGAGGATATTTGGCTGTCTATGTTGGACCTGAGCATAGGAGGTTCATCATTCCTACCACTTACCTTAGCCATTCTTTGTTCAAACTGTTGCTGGAAAAGGCTGCAGAGGAGTTTGGTTTTGACCATAGTGGTGGACTCACAATTCCATGTGAGATTGAGACCTTTAAATACCTTCTCAATTGCATGGAGAACAATCACAAAGATCATCATGATCACACTTCTGGAAACACAGGAACCATAGAAGAGTAA 483 0.4079 MEEVGGSKLKALGQITRLKEMFQKWQTTPLGSKETNDHCHNVNHGGISPMINKRLTNLVYCDSDEESCYSPEPPHDVPRGYLAVYVGPEHRRFIIPTTYLSHSLFKLLLEKAAEEFGFDHSGGLTIPCEIETFKYLLNCMENNHKDHHDHTSGNTGTIEE 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1034 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 159 IPR003676 GO:0009733
Lal7g1034 160 Pfam Auxin responsive protein 68 139 IPR003676 GO:0009733
Lal7g1034 160 PANTHER SMALL AUXIN-UP RNA-RELATED 9 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1034 Lal-Chr7 16504701 16506184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1034 1 146 Calmodulin-binding Proteins AT3G43120 66.216 5.92e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1034 K14488 - gmx:100795275 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1034 7 16504701 16506184 Lal7g1034 7 16504701 16506184 ECH
Lal14g1633 14 16711054 16713543 Lal7g1034 7 16504701 16506184 LSH
Lal7g1034 7 16504701 16506184 Lal4g1498 4 19139393 19140970 PCT
Lal4g1498 4 19139393 19140970 Lal7g1034 7 16504701 16506184 PCT