Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1498 ATGGATGAGGGTGGAGGCTCAAAACTAAGTGGAATAAGGCAAATTGTTCGATTAAAGGAAATACTTCAGAAGTGGCAAAATGTAACCTTAGGTCCAAAAACTTATGATTCAAAAAGAACTTATTCTGATCCAAGAAAAACAAGTTCAGAACCAAATTCTGGTACAACTTCTGCTGCAATATCACCATTAATTAACAAAAGGATAACAAGTGTTATAGGTTGTGACTCAGATGAAGAAGGTTGTCAAAGTCCTGAACCACCACCTGATGTTCCAAAAGGTTACTTAGCTGTTTATGTTGGGTCAGAACTTAGGAGGTTCATTATTCCAACCACTTACCTTAGTCATTTTCTATTCAAAGTATTGCTTGAAAAAGCTGAAGATGAATATGGGTTTGATCAAAGTGGTGGCCTCACTATTCCATGTGAGATTGAGACTTTCAAATACCTCCTCAAGTGCATAGAGACCAATCCATTTATGTGGTTCCCATGCATATGTTAG 498 0.3715 MDEGGGSKLSGIRQIVRLKEILQKWQNVTLGPKTYDSKRTYSDPRKTSSEPNSGTTSAAISPLINKRITSVIGCDSDEEGCQSPEPPPDVPKGYLAVYVGSELRRFIIPTTYLSHFLFKVLLEKAEDEYGFDQSGGLTIPCEIETFKYLLKCIETNPFMWFPCIC 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1498 165 PANTHER AUXIN-RESPONSIVE PROTEIN-LIKE PROTEIN 7 157 - -
Lal4g1498 165 Pfam Auxin responsive protein 73 153 IPR003676 GO:0009733
Lal4g1498 165 MobiDBLite consensus disorder prediction 36 57 - -
Lal4g1498 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 157 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1498 Lal-Chr4 19139393 19140970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1498 1 157 Calmodulin-binding Proteins AT3G43120 67.722 2.97e-72 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1498 K14488 - cpap:110808074 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1498 4 19139393 19140970 Lal4g1498 4 19139393 19140970 ECH
Lal14g1633 14 16711054 16713543 Lal4g1498 4 19139393 19140970 PCT
Lal7g1034 7 16504701 16506184 Lal4g1498 4 19139393 19140970 PCT
Lal4g1498 4 19139393 19140970 Lal14g1633 14 16711054 16713543 PCT
Lal4g1498 4 19139393 19140970 Lal7g1034 7 16504701 16506184 PCT