Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1007 ATGTTAATTATGGGGGTATTTCCGTCATTCACAAACCTAACTCCATTTTCCAGTATAAATGGTGAACCAAGGCTAACATTTGGACTCGTACCACCATTCCCTAAACCTCTTACTCGCACCTTCTCTGCTCTTCTTCCTTCAAAGTTCAATTTGCATTATGTCGTAGATCTCGTAGATCTCGTTGTCGGATTTAGTGTTTTTAACTTCGAGCAAGTAAAGATGGCAGCGGAGACTTTCCTATTTACCTCTGAGTCAGTGAACGAGGGACACCCTGACAAGCTCTGTGATCAAATCTCTGATGCCGTGCTCGATGCCTGCTTGGAACAGGATGCAGACAGCAAGGTTGCGTGTGAAACTTGCACCAAGACCAACTTGGTGATGGTCTTTGGCGAGATCACAACCAAGGCCAACATTGACTATGAGAAAATTGTCCGCGAAACTTGCAGGAACATTGGTTTTGTTTCTGAAGATGTTGGTCTTGATGCTGACAACTGCAAGGTCCTTGTCAACATTGAGCAGCAGAGCCCTGATATTGCACAGGGTGTACATGGTCATCTCACTAAGAGACCTGAGGATATTGGTGCTGGTGATCAGGGTCACATGTTTGGCTATGCCACTGATGAGACCCCTGAGCTTATGCCTTTGAGCCATGTTCTTGCCACCAAGCTTGGTGCTCGTCTCACTGAGGTTCGCAAGAACGGTACCTGTCGCTGGTTGAGGCCTGATGGTAAGACCCAAGTCACTGTTGAGTATTACAATGACAAGGGTGCCATGGTTCCAATCCGTGTCCACACCGTGCTTATCTCCACACAGCATGATGAGACTGTGACTAACGATGAAATTGCTGCTGATCTGAAAGAGCATGTTATCAAGCCTGTGATTCCCGAGAAGTACCTTGATGAGAAGACCATTTTCCACTTGAACCCTTCAGGCCGTTTTGTCATCGGTGGACCTCATGGAGATGCTGGTCTCACCGGGCGTAAGATCATCATCGACACATATGGGGGATGGGGTGCACATGGTGGTGGTGCTTTCTCAGGAAAGGACCCAACCAAGGTTGACAGGAGTGGAGCTTATATTGTGAGACAAGCTGCTAAAAGCATTGTTGCGAGTGGACTTGCAAGGAGGACCATTGTGCAAGTGTCCTATGCCATTGGTGTGCCTGAGCCTTTATCTGTCTTTGTTGACACATATGGGACTGGCAAGATCCCTGACAAGGAGATCCTCAAAATTGTTAAGGAGAACTTTGATTTCAGGCCTGGTATGATCTCTATCAACCTTGATCTGAAGAGGGGTGGCAACAAAAGGTTCTTGAAGACTGCTGCCTATGGACATTTTGGAAGAGATGATGCTGATTTCACATGGGAAGTAGTGAAGCCCCTCAAGTGGGAGAAGGCTTAA 1401 0.4704 MLIMGVFPSFTNLTPFSSINGEPRLTFGLVPPFPKPLTRTFSALLPSKFNLHYVVDLVDLVVGFSVFNFEQVKMAAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDADSKVACETCTKTNLVMVFGEITTKANIDYEKIVRETCRNIGFVSEDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRTIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNKRFLKTAAYGHFGRDDADFTWEVVKPLKWEKA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1007 466 Pfam S-adenosylmethionine synthetase, C-terminal domain 315 456 IPR022630 GO:0004478|GO:0006556
Lal7g1007 466 Hamap S-adenosylmethionine synthase [metK]. 77 465 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal7g1007 466 SUPERFAMILY S-adenosylmethionine synthetase 315 463 IPR022636 GO:0004478|GO:0006556
Lal7g1007 466 SUPERFAMILY S-adenosylmethionine synthetase 190 314 IPR022636 GO:0004478|GO:0006556
Lal7g1007 466 Pfam S-adenosylmethionine synthetase, central domain 192 313 IPR022629 GO:0004478|GO:0006556
Lal7g1007 466 CDD S-AdoMet_synt 80 459 - -
Lal7g1007 466 Pfam S-adenosylmethionine synthetase, N-terminal domain 79 176 IPR022628 GO:0004478|GO:0006556
Lal7g1007 466 ProSitePatterns S-adenosylmethionine synthase signature 2. 341 349 IPR022631 GO:0004478|GO:0006556
Lal7g1007 466 Gene3D - 192 456 - -
Lal7g1007 466 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 76 466 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal7g1007 466 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 76 466 - -
Lal7g1007 466 SUPERFAMILY S-adenosylmethionine synthetase 78 184 IPR022636 GO:0004478|GO:0006556
Lal7g1007 466 Gene3D - 86 354 - -
Lal7g1007 466 ProSitePatterns S-adenosylmethionine synthase signature 1. 194 204 IPR022631 GO:0004478|GO:0006556
Lal7g1007 466 TIGRFAM metK: methionine adenosyltransferase 80 461 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal7g1007 466 Gene3D - 79 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1007 Lal-Chr7 16296287 16298588 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1007 K00789 - egr:104415288 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1007 7 16296287 16298588 Lal7g1007 7 16296287 16298588 ECH
Lal7g1007 7 16296287 16298588 Lal18g0402 18 3405413 3406597 ECH