Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0402 ATGGCAGCAGAGACCTTTCTATTCACTTCTGAGTCTGTCAATGAGGGTCACCCTGACAAGCTGTGCGACCAGATATCCGATGCAGTTCTTGATGCCTGCCTTGAACAGGATCCTGAAAGCAAGGTTGCCTGTGAGACATGCACCAAAACTAACATGGTCATGGTCTTTGGAGAGATTACAACTAAGGCCAATGTTGACTACGAGAAGATTGTTCGAGACACATGCCGGAACATTGGATTTACCTCTGACGATGTAGGTCTTGATGCTGACAAATGCAAGGTTCTGGTCAACATTGAGCAGCAGAGCCCTGATATTGCTCAGGGTGTGCATGGCCACTTCACTAAGCTGCCAGAGGAGGTTGGTGCTGGTGATCAGGGTCACATGTTTGGGTATGCGACTGACGAAACCCCTGAATTAATGCCATTGAGCCACGTTCTTGCAACCAAATTAGGAGCTAAGCTTACCGAGGTTAGGAAGAATGGCACCTGCTCATGGTTGAGACCAGATGGTAAGACACAAGTAACTGTTGAGTACTACAATGAAAACGGTGCCATGGTTCCTGTTCGAGTCCACACTGTCCTCATTTCTACCCAGCATGATGAGACTGTCACTAATGATCAAATTGCTGCTGATCTTAAGGAGCATGTTATCAAGCCTGTCATTCCTGAGAAGTACCTAGATGAGAAGACCATCTTCCACCTTAACCCTTCTGGCCGATTTGTCATCGGTGGACCTCATGGTGATGCTGGTCTCACCGGAAGAAAGATTATCATCGATACTTATGGTGGCTGGGGTGCTCATGGAGGCGGTGCATTCTCCGGGAAGGACCCCACTAAGGTTGACAGAAGTGGTGCCTATCTTGTGAGGCAGGCAGCAAAAAGTGTTGTTGCCAATGGACTCGCGCGCAGGGCTATTGTTCAAGTTTCTTATGCCATCGGTGTTCCTGAGCCCTTGTCTGTATTTGTTGATACTTATGGAACTGGAAAGATCCCAGACAAGGAAATTCTTCAAATTGTGAAGGAGAACTTCGATTTTAGACCCGGAATGATCACCATTAACTTGGACCTTAAAAGGGGTGGTCACAGGTTTCTCAAGACAGCTGCTTATGGACACTTTGGAAGAGATGACCCTGACTTCACTTGGGAAGTTGTGAAGCCACTCAAGTGGGAGAAGCCTCAAGCTTAA 1185 0.4743 MAAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFTSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKLPEEVGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCSWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYLVRQAAKSVVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKENFDFRPGMITINLDLKRGGHRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0402 394 Gene3D - 13 281 - -
Lal18g0402 394 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 4 394 - -
Lal18g0402 394 SUPERFAMILY S-adenosylmethionine synthetase 242 391 IPR022636 GO:0004478|GO:0006556
Lal18g0402 394 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Lal18g0402 394 SUPERFAMILY S-adenosylmethionine synthetase 118 241 IPR022636 GO:0004478|GO:0006556
Lal18g0402 394 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal18g0402 394 Pfam S-adenosylmethionine synthetase, central domain 119 240 IPR022629 GO:0004478|GO:0006556
Lal18g0402 394 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Lal18g0402 394 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 4 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal18g0402 394 CDD S-AdoMet_synt 7 385 - -
Lal18g0402 394 ProSitePatterns S-adenosylmethionine synthase signature 2. 268 276 IPR022631 GO:0004478|GO:0006556
Lal18g0402 394 Pfam S-adenosylmethionine synthetase, C-terminal domain 242 382 IPR022630 GO:0004478|GO:0006556
Lal18g0402 394 Gene3D - 119 382 - -
Lal18g0402 394 Hamap S-adenosylmethionine synthase [metK]. 4 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal18g0402 394 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Lal18g0402 394 Gene3D - 6 244 - -
Lal18g0402 394 TIGRFAM metK: methionine adenosyltransferase 7 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0402 Lal-Chr18 3405413 3406597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0402 K00789 - gmx:100777770 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0402 18 3405413 3406597 Lal18g0402 18 3405413 3406597 ECH
Lal14g1604 14 16498453 16500860 Lal18g0402 18 3405413 3406597 ECH
Lal7g1007 7 16296287 16298588 Lal18g0402 18 3405413 3406597 ECH
Lal19g1150 19 15034498 15036718 Lal18g0402 18 3405413 3406597 ECH