Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0940 ATGTCGTCACCGATGCAGAAGAACATAAAGCAAAAGGTTCTCACGTGCCTTACCAAGCTCTCCGACCGTGATACTCACTCAATCGCCATCGCCGAACTCGAATCAATCGCTCGGAACCTTGATCGGACCACGCTTTCGGCGTTCCTCTCATGCATACTCTCTACCGATTCCTCCGATAAATCACTAGTTCGCAAGCAATGCGTGATCCTGTTAGGTTTCCTTGCGGAAACGCACGGTAACGCACTCTCTCCTTACCTCTCCAAAATCCTCGCTGCCGTAATCCGCCGCCTCCGCGACCAGGACTCGTCGGTCCGAACCGCATGCATCAATTCAGTTTCTGCATTGTCGCGTCACGTCACCAAGCAACAGTTCTCCACGTTCCTGAAACCGTTAACAGATGCGTTGTTTACGGAACAGGATCAGAATTCGCAGATTGGCGCGGCTCTTTGTTTAGCTTCAGCTATTGACGGAGCTCCGGATCCGGACCCGGTTATATTGGCGAAGTTGTTGCCAAGGTTCGAGAAATTACTGAAGCGCGACGCGTTTAAGGCGAAGATGGCGGTGATGACGCTGATCGGAAGCGTCGTTGCGGTCGGTGGCGTGTCGAATCACACAATTTTGAAGAGTTTGATTCCTTGCTTGGTGGAGTCATTGAGCAGCGGCGATTGGGCGACTAGGAAGGCTGCGGCAGAGGCGTTGGCGGTGATGGCAAACGTGGAGAGGGACTACTTATCGGAATTCAAGGCTGAATGCTTGAAAGTTTTCGAGAATCGACGATTCGATAAGGTAAAGGTAGTTCGAGAAGTTATGAATCAAATGTTGGAAGCGTGGACGCAGATTCCTGATGTATCGGATGAATTTTCGCCACCTCCTCAATCACAATCTTCTTCAAAAGACAACAGTAACACGAATGATGAGCACAATCCTCTGGACTGTCAAAATTCATGTAATCCTCGTTCAGTAATGGTGAATTTGCGGAAGAATTCCACTCCGATTAGAAGATTCAGTCTACCTGATTGCTCTTCTGCTAGCAATGTTAAGAATACAAGTGCTTTAAGTACTAACAAGAGAATGAGTTTAGGTGTTTCGCGAAAATTTAACCATAAGAATTGGGATGTTCAAATTGCTGTTTCTAATGATCCCTCTGCAGCCATGGCTGATCTTGGGGATCTTCAAGAGACAAATGGATCTTTTTTGGAAAGAAGCAAAAATAATAAAAGCAGACTTTCAAAGCCAGATAGGAAACATGCTCTATTCAATAAAAGTCCCGACAAAATGCAGAAGTTTGGTGGGTCCAAAACTGGATCTCATGTGGTTCCATATCATGAAGAGAATCAAAACTCTGTCCCTGTTAGTAATGTCAGTAAAGATATCTTAAAGAATGACAAAGAGAATGATAATTTATCTTTGATCCGCAACCAGTTACATCAAATTGAGAAGCAGCAGTCAAGTCTACTTGATCTTCTGCAGAAATTTATGGGAAGCTCACAATGTGGAATGCGTTCTTTAGAGACTCGTGTACATGGCCTTGAGTTGGCATTGGATGAGATCTCTCATGATTTGGCAATATCAAGTGGAAGGATGGCTAATTATGATGTACCGGGCAATGCATGTTGCTTGCTACCTGGAGCAGAATTCTTGAGATCCAGGTTCTGGAAGAAAACACAGGGTCCATATTCGTCCTCCCGGTTCTCTAAATCTGGTAGCACCCCAACACTTGCTGCCATGCACTACAAAGCTGACAGGAATGCTGAAACTAGGTTGGCAAACCACAGACTCAGGTTTGATGGAGGCTTCATCACTAATCCGTTGGCAGACATTCATACTAGTGCAATGGATTTTGCAAGATCAGAGCCAATTTAA 1863 0.4541 MSSPMQKNIKQKVLTCLTKLSDRDTHSIAIAELESIARNLDRTTLSAFLSCILSTDSSDKSLVRKQCVILLGFLAETHGNALSPYLSKILAAVIRRLRDQDSSVRTACINSVSALSRHVTKQQFSTFLKPLTDALFTEQDQNSQIGAALCLASAIDGAPDPDPVILAKLLPRFEKLLKRDAFKAKMAVMTLIGSVVAVGGVSNHTILKSLIPCLVESLSSGDWATRKAAAEALAVMANVERDYLSEFKAECLKVFENRRFDKVKVVREVMNQMLEAWTQIPDVSDEFSPPPQSQSSSKDNSNTNDEHNPLDCQNSCNPRSVMVNLRKNSTPIRRFSLPDCSSASNVKNTSALSTNKRMSLGVSRKFNHKNWDVQIAVSNDPSAAMADLGDLQETNGSFLERSKNNKSRLSKPDRKHALFNKSPDKMQKFGGSKTGSHVVPYHEENQNSVPVSNVSKDILKNDKENDNLSLIRNQLHQIEKQQSSLLDLLQKFMGSSQCGMRSLETRVHGLELALDEISHDLAISSGRMANYDVPGNACCLLPGAEFLRSRFWKKTQGPYSSSRFSKSGSTPTLAAMHYKADRNAETRLANHRLRFDGGFITNPLADIHTSAMDFARSEPI 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0940 620 Gene3D - 1 360 IPR011989 -
Lal7g0940 620 Coils Coil 461 481 - -
Lal7g0940 620 MobiDBLite consensus disorder prediction 395 435 - -
Lal7g0940 620 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 6 611 - -
Lal7g0940 620 ProSiteProfiles HEAT repeat profile. 89 127 IPR021133 -
Lal7g0940 620 MobiDBLite consensus disorder prediction 285 317 - -
Lal7g0940 620 MobiDBLite consensus disorder prediction 404 422 - -
Lal7g0940 620 Pfam HEAT repeat 210 238 IPR000357 GO:0005515
Lal7g0940 620 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 6 611 IPR033337 GO:0005874|GO:0008017
Lal7g0940 620 SUPERFAMILY ARM repeat 7 294 IPR016024 -
Lal7g0940 620 MobiDBLite consensus disorder prediction 281 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0940 Lal-Chr7 15761266 15765238 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0940 - - gmx:100789197 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1100 19 14648719 14653468 Lal7g0940 7 15761266 15765238 ECH
Lal7g0940 7 15761266 15765238 Lal7g0940 7 15761266 15765238 ECH
Lal7g0940 7 15761266 15765238 Lal19g1100 19 14648719 14653468 LSH