Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0932 ATGGCTGCAAATGCTTCAAGGTTCATCAAGTGTGTTACCGTTGGTGATGGAGCCGTAGGCAAAACCTGCATGCTAATTTGCTACACAAGCAACAAATTCCCTACGGACTACATTCCAACGGTGTTTGATAATTTCAGTGCAAATGTGGTTGTTGAAGGCACAACAGTGAATTTAGGCCTTTGGGACACAGCTGGACAGGAGGATTACAACAGGCTTAGGCCTTTGAGCTATAGGGGTGCTGATGTCTTTGTCTTGGCATTCTCTTTAGTTAGTGGTGCGAGCTATGAGAACGTGCTGAAAAAGTGGATCCCTGAACTCCAGCATTTTGCCCCTGGCGTCCCAGTGGTACTAGTTGGAACCAAATTGGATCTCCGACAAGACAAATACTATTTGGCTGATCACCCTGGTCTGATGCCTGTAACTTCAGAGCAAGGCGAGGAACTGCGAAAACTGGTAGGAGCTGCCTATTATATTGAGTGCAGCTCAAAAACTCAGCAGAATGTCAAGTCAGTTTTTGATGCTGCGATCAAGGTGGTCATAAAGCCCCCGCCAAAGCAGCAAGAGAAGAAGAAGAAAAAACCACGCCGAGGATGTCTTTTAAATGTCATGTGTGGAAGGAATATTGTTCGCCATAAATAA 639 0.4554 MAANASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSGASYENVLKKWIPELQHFAPGVPVVLVGTKLDLRQDKYYLADHPGLMPVTSEQGEELRKLVGAAYYIECSSKTQQNVKSVFDAAIKVVIKPPPKQQEKKKKKPRRGCLLNVMCGRNIVRHK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0932 212 Pfam Ras family 10 179 IPR001806 GO:0003924|GO:0005525
Lal7g0932 212 ProSiteProfiles small GTPase Rab1 family profile. 4 212 - -
Lal7g0932 212 Gene3D - 2 201 IPR027417 -
Lal7g0932 212 PRINTS Transforming protein P21 ras signature 9 30 - -
Lal7g0932 212 PRINTS Transforming protein P21 ras signature 32 48 - -
Lal7g0932 212 PRINTS Transforming protein P21 ras signature 49 71 - -
Lal7g0932 212 PRINTS Transforming protein P21 ras signature 111 124 - -
Lal7g0932 212 PRINTS Transforming protein P21 ras signature 157 179 - -
Lal7g0932 212 CDD Rop_like 8 180 - -
Lal7g0932 212 ProSiteProfiles small GTPase Ras family profile. 4 203 IPR001806 GO:0003924|GO:0005525
Lal7g0932 212 PANTHER RAC-LIKE GTP-BINDING PROTEIN ARAC10-RELATED 1 203 - -
Lal7g0932 212 ProSiteProfiles small GTPase Rho family profile. 2 179 - -
Lal7g0932 212 SMART rab_sub_5 9 182 - -
Lal7g0932 212 SMART rho_sub_3 11 182 IPR001806 GO:0003924|GO:0005525
Lal7g0932 212 PANTHER RHO FAMILY GTPASE 1 203 IPR003578 GO:0005525|GO:0007264
Lal7g0932 212 SMART ras_sub_4 6 182 - -
Lal7g0932 212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 179 IPR027417 -
Lal7g0932 212 TIGRFAM small_GTP: small GTP-binding protein domain 9 173 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0932 Lal-Chr7 15714268 15718107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0932 9 195 EF-hand Containing Proteins AT5G27540 24.868 1.91e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0932 K04392 - gmx:100806681 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0932 7 15714268 15718107 Lal7g0932 7 15714268 15718107 ECH
Lal14g1531 14 16073146 16077384 Lal7g0932 7 15714268 15718107 LSH
Lal7g0932 7 15714268 15718107 Lal19g1088 19 14555689 14560006 LSH