Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0931 ATGGGAGATAGCAAACGTAAAAGAGGATGCAAACCCAAAACCCCTAAAACCCTAGACACCGTTCCTAACCCCACCAACGACGTCGACCTCATCGACAACCCCTCCTCTCCCCACCACTGTCGCCGCCGCGGCCGTCCCAAGAAGCTCCCAAACCATTCCGACACCCCACTCTCCCCCTCCACCTCTCGCCGTGATGGCCCTGTATCCCCTATGGCGTTGGTGGCGATGGAAGCGGACCCTGCCTGGGAGAACGTTGCGGCGCGGGTGTTTCCGGCGATGGACTCGGTGGTTAAGGTTTTCTGCGTTCACACGGAGCCCAATTTTTCGCTTCCATGGCAGAGGAAAAGACAGTACAGTTCGAGTAGCAGTGGGTTTGTGATTGGTGGGAGAAGAGTTCTAACGAATGCGCATTCAGTGGAACATTATACGCAGGTTAAGCTCAAGAAGCGTGGTTCTGATACTAAATACTTAGCTACTGTGCTTGCCATTGGAACCGAGTGTGACATTGCCATGCTTACTGTTGATGATGATGAGTTCTGGCAAGGGATGTCGCCTTTAGAATTTGGGGATTTGCCTACACTTCAAGATTCGGTCACCGTTGTCGGCTACCCAATTGGTGGAGACACTATTTCTGTGACCAGTGGTGTTGTATCGCGTATCGAGATTCTATCTTATGTCCATGGTTCCACCGAGCTTTTAGGTTTACAAATAGATGCTGCTATCAACTCTGGCAATTCTGGTGGGCCTGCATTTAATGATAAAGGAAAATGTGTGGGGATTGCATTTCAGTCCCTCAAGCATGAAGATGCAGAGAATATAGGTTATGTCATTCCAACACCAGTTATAACGCACTTCATCCAAGATTATGAGAATAACGGAAAATATACTGGGTTTCCTATTCTTGGGGTTGAATGGCAGAAAATGGAAAATCCTGATCTGAGAACAGCAATGGGAATGAGACCTAATGAGAAAGGTGTGCGTATTAGAAGAGTTGATCCTACTGCTCCAGAATCCAAGGTTTTGAAACCATCAGATGTTATCCTTAGCTTTGATGGGGTTGATATTGCCAATGATGGAACAGTTCCATTTCGCCATGGGGAACGCATTGCTTTCAGTTATCTCATATCCCAGAAATATAGCGGTGATAATGCAGCAATCAAAGTACTGCGAAATTCAGATGTTTTCAAATTTGACATTAAACTCGACAGTCACAAAAGGCTCATTCCAGCACACAGCAAGGGCAAGCCTCCCTCATATTATATTATTGCAGGATTTGTTTTTACAGCTGTTTCAGTTCCATATCTTCGTTCTGAGTACGGAAAGGATTATGAGCTTGAAGCTCCTGTCAAGCTTTTGGATAAACTGGTGCATTCAATGCCACAATCACCAGATGAACAAATTGTTGTGGTCTCTCAGGTACTGGTCGCTGATATCAACATCGGATATGAGGATATTGTTAACACCCAGGTTGATAATCGCTTTTCCTTTGTTTTTCTTTCTGCTTTCCTTGCTGGTAGTTATGTTCGATTAACTGCTAAATTCCTTACTGCCTTCTACCCTGTATGTTTGTTAAAGGTCCTTGCTTTCAATGGTAAGCCTGTGAAGAATCTTAAGAGCTTGGCCACTATGGTAGAGAGCTACCATGATGAATATCTAAAATTTGATCTAGAATATGATCAGATAGTGGTTCTTTGCACGAAGACTGCAAAAGCAGCTACTCTGGATATTCTTTCCACACACTGCATCCCATCATCAATGTCTGATGATCTTAAGTCATGA 1779 0.4474 MGDSKRKRGCKPKTPKTLDTVPNPTNDVDLIDNPSSPHHCRRRGRPKKLPNHSDTPLSPSTSRRDGPVSPMALVAMEADPAWENVAARVFPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPLEFGDLPTLQDSVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDAENIGYVIPTPVITHFIQDYENNGKYTGFPILGVEWQKMENPDLRTAMGMRPNEKGVRIRRVDPTAPESKVLKPSDVILSFDGVDIANDGTVPFRHGERIAFSYLISQKYSGDNAAIKVLRNSDVFKFDIKLDSHKRLIPAHSKGKPPSYYIIAGFVFTAVSVPYLRSEYGKDYELEAPVKLLDKLVHSMPQSPDEQIVVVSQVLVADINIGYEDIVNTQVDNRFSFVFLSAFLAGSYVRLTAKFLTAFYPVCLLKVLAFNGKPVKNLKSLATMVESYHDEYLKFDLEYDQIVVLCTKTAKAATLDILSTHCIPSSMSDDLKS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0931 592 Pfam PDZ domain 408 589 IPR041517 -
Lal7g0931 592 CDD PDZ_serine_protease 299 391 - -
Lal7g0931 592 PANTHER PROTEASE DO-LIKE 9 31 490 - -
Lal7g0931 592 PANTHER PROTEASE DO-LIKE 9 525 591 - -
Lal7g0931 592 Gene3D - 497 592 IPR046449 -
Lal7g0931 592 Gene3D - 407 493 IPR046449 -
Lal7g0931 592 PANTHER - 31 490 - -
Lal7g0931 592 PANTHER - 525 591 - -
Lal7g0931 592 Gene3D - 180 291 IPR043504 -
Lal7g0931 592 Pfam Trypsin-like peptidase domain 123 260 - -
Lal7g0931 592 MobiDBLite consensus disorder prediction 1 68 - -
Lal7g0931 592 Gene3D - 72 179 IPR043504 -
Lal7g0931 592 SUPERFAMILY Trypsin-like serine proteases 91 294 IPR009003 -
Lal7g0931 592 SUPERFAMILY PDZ domain-like 323 406 IPR036034 GO:0005515
Lal7g0931 592 PRINTS HtrA/DegQ protease family signature 124 136 IPR001940 GO:0004252|GO:0006508
Lal7g0931 592 PRINTS HtrA/DegQ protease family signature 152 172 IPR001940 GO:0004252|GO:0006508
Lal7g0931 592 PRINTS HtrA/DegQ protease family signature 194 218 IPR001940 GO:0004252|GO:0006508
Lal7g0931 592 PRINTS HtrA/DegQ protease family signature 231 248 IPR001940 GO:0004252|GO:0006508
Lal7g0931 592 PRINTS HtrA/DegQ protease family signature 340 352 IPR001940 GO:0004252|GO:0006508
Lal7g0931 592 Pfam PDZ domain 301 401 IPR001478 GO:0005515
Lal7g0931 592 MobiDBLite consensus disorder prediction 18 32 - -
Lal7g0931 592 Gene3D - 297 406 IPR036034 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0931 Lal-Chr7 15705086 15709708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0931 K25897 - gmx:100817187 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0931 7 15705086 15709708 Lal7g0931 7 15705086 15709708 ECH
Lal14g1530 14 16065706 16071673 Lal7g0931 7 15705086 15709708 LSH