Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1530 ATGGGAGATCACAAACGCAAGCGGGGACGCAAACCCAAAACCCCCTCCCCCGAAACCCTAGACACCGCGCCTAACACCGCCACCGCCACCGTTGATAAACCCTTCAGCGTTGGCAACGTCGATCTCATCGAAAACCCCTCATCTTCCCGCCTCAGTCGCCGCCGTGGTCGTCCCAAGAAGCTCCCCAACCACTCCGACAAGCCAGTCTCCCCCGCCGCAGAGCGTCGCTTCACCCGCACCGCCATTCAAAATGGCGCTGACTTCGCAGTCCCCAACGATGACGCTGGCTCCCCAACGGCCGTGGTAGCGATGGATGCGGACCCGGCTTGGGAGAGCGTATCGGCGCGGGTGTTGCCGGCGATGGACTCGGTTGTGAAAGTGTTCTGCGTTCACACTGAGCCTAATTTTTCGCTTCCGTGGCAGAGGAAGAGACAGTATAGTTCGAGTAGCAGCGGGTTTGTGATTGGGGGCAGAAGGGTTCTGACGAATGCACATTCGGTGGAACATTATACGCAGGTTAAGCTCAAGAAGCGTGGCTCTGATACTAAGTACTTGGCTACTGTGCTTGCCATCGGTACCGAGTGTGACATTGCCATGCTTACAGTTGATGATGATGAATTCTGGCATGGGATGTCAACTGTAGAGTTTGGGGATTTGCCAACACTTCAAGATGCGGTTACTGTTGTGGGCTACCCAATTGGTGGAGACACTATTTCTGTGACCAGTGGTGTTGTATCACGCATTGAGATTCTATCTTACGTCCATGGTTCCACCGAGCTTCTAGGTTTACAGATAGATGCTGCTATCAATTCTGGCAATTCTGGCGGGCCTGCCTTTAATGATAAAGGAAACTGTGTGGGGATTGCATTTCAGTCCCTCAAGCATGAAGATGCAGAGAATATAGGTTATGTCATTCCGACACCAGTTATCACGCACTTCATCCAGGACTATGAGAAGAACGGAAAATATACTGGGTTTCCTATTCTTGGGATTGAGTGGCAGAAAATGGAAAATCCTGATCTGCGAACAGCAATGGGCATGAGACCCAATGAGAAAGGTGTGCGTATTAGAAGAATTGATCCTACTGCTCCAGAATCTAAGGTTTTGAAACCATCGGATATTATCCTTAGCTTTGATGGGGTTGATATTGCCAATGATGGAACAGTTCCATTTCGCCATGGGGAACGGATTGGTTTCAGTTATCTCATATCCCAGAAATATAGTGGGGATGATGCGGCAATCAAAGTTTTGCGGAACTCAGATGTTTTCAGATTTGACATTAAACTCCATAGTCACAGAAGGCTCATTCCAGCACACAGCAAGGGCAAGCCTCCCTCATATTATATTATCGCAGGATTTGTTTTTACAGCCGTTTCGGTTCCATATCTTCGTTCTGAGTATGGAAAAGATTATGAGTTTGAAGCTCCTGTCAAGCTTTTGGATAAATTGGTGCATGCAATGCCACAATCACCAGATGAGCAAGTTGTTGTGGTCTCTCAGGTGCTGGTGGCTGATATCAACATCGGATATGAAGATATTGTTAACACCCAGGTCGTTGGTTTCAATGGCAAGCCTGTGAAGAATCTTAAGAGCTTGGCCACTATGGTAGAGAGCTGTGATGATGAATATCTAAAATTTGATCTAGATTATGCCCAGATAGTGGTTCTTCGCACAAAGACTGCAAAAGCAGCTACTCTGGATATTCTTGCAACACACTGCATTCCATCAGCAATGTCTGATGATCTTAAATCATGA 1755 0.4786 MGDHKRKRGRKPKTPSPETLDTAPNTATATVDKPFSVGNVDLIENPSSSRLSRRRGRPKKLPNHSDKPVSPAAERRFTRTAIQNGADFAVPNDDAGSPTAVVAMDADPAWESVSARVLPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWHGMSTVEFGDLPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDAENIGYVIPTPVITHFIQDYEKNGKYTGFPILGIEWQKMENPDLRTAMGMRPNEKGVRIRRIDPTAPESKVLKPSDIILSFDGVDIANDGTVPFRHGERIGFSYLISQKYSGDDAAIKVLRNSDVFRFDIKLHSHRRLIPAHSKGKPPSYYIIAGFVFTAVSVPYLRSEYGKDYEFEAPVKLLDKLVHAMPQSPDEQVVVVSQVLVADINIGYEDIVNTQVVGFNGKPVKNLKSLATMVESCDDEYLKFDLDYAQIVVLRTKTAKAATLDILATHCIPSAMSDDLKS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1530 584 MobiDBLite consensus disorder prediction 18 33 - -
Lal14g1530 584 Gene3D - 435 584 IPR046449 -
Lal14g1530 584 PANTHER - 4 583 - -
Lal14g1530 584 MobiDBLite consensus disorder prediction 1 74 - -
Lal14g1530 584 Gene3D - 208 319 IPR043504 -
Lal14g1530 584 SUPERFAMILY Trypsin-like serine proteases 117 322 IPR009003 -
Lal14g1530 584 CDD PDZ_serine_protease 327 427 - -
Lal14g1530 584 Pfam Trypsin-like peptidase domain 151 288 - -
Lal14g1530 584 PRINTS HtrA/DegQ protease family signature 152 164 IPR001940 GO:0004252|GO:0006508
Lal14g1530 584 PRINTS HtrA/DegQ protease family signature 180 200 IPR001940 GO:0004252|GO:0006508
Lal14g1530 584 PRINTS HtrA/DegQ protease family signature 222 246 IPR001940 GO:0004252|GO:0006508
Lal14g1530 584 PRINTS HtrA/DegQ protease family signature 259 276 IPR001940 GO:0004252|GO:0006508
Lal14g1530 584 PRINTS HtrA/DegQ protease family signature 368 380 IPR001940 GO:0004252|GO:0006508
Lal14g1530 584 Pfam PDZ domain 329 429 IPR001478 GO:0005515
Lal14g1530 584 Pfam PDZ domain 436 581 IPR041517 -
Lal14g1530 584 SUPERFAMILY PDZ domain-like 351 434 IPR036034 GO:0005515
Lal14g1530 584 PANTHER PROTEASE DO-LIKE 9 4 583 - -
Lal14g1530 584 Gene3D - 100 207 IPR043504 -
Lal14g1530 584 Gene3D - 325 434 IPR036034 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1530 Lal-Chr14 16065706 16071673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1530 K25897 - gmx:100817187 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1530 14 16065706 16071673 Lal14g1530 14 16065706 16071673 ECH
Lal14g1530 14 16065706 16071673 Lal7g0931 7 15705086 15709708 LSH