Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0915 ATGCAATCTTTATGTGTGAAAAGTTTTGTTGGTGTGGGAAATGATTGGGTGAATTGCATGAGAAGAAAGAGTAGTAATGTTATTGTAGCATGTGGTTCTTCAAAGGGAGACCCAATGAGTGTTTCAACCTCTTCATTTGTGTCTCGTACCCAAACATATGCTTTGTTGAAGCATCAAATGGAGGTAGCTGCAAAATCTGAGGATTACAAAGAAGCAGCAAGGATAAGAGACTCACTAAAGTTATTTGAAGATGAGGAACCTGTTTTGCGTCTCACTAGACTCTTGAATGAAGCTGTAGCTGATCAGAGGTTTCAGGATGCAGCTAGATATCGTGATGAGCTAAACAAAATTGCTCCACATTCTCTTTTAAAATGTTCCAGTGAAGCTACAACGCTGGGAATCAAGGTTCAAGTTAGAAGTGTATATATAGAGAGCAGAAGTCAGCCTTCAAAGGGGCTATACTTCTTTGCATATAGAATAAGAATTACGAATAACTCGGATCAACCTGTTCAACTTCTCAAGAGGCATTGGATTATAACTGATGCTAATGGGAAAACAGAAAATGTTAGGGGGATAGGGGTTGTTGGTGAACAGCCAACAATACTTCCAGGGACTAGTTTTGAATACTCTTCAGCATGTCCATTAAGCACACCAAGTGGTAAAATGGAAGGTGACTTTGAGATGATACATGTCGATAGAGTAAACTCCCGATCATTCAATGTGGCCATTGCACCTTTTTCTCTTGCTATGCTTGGAGATGATGGTAGTACTGTTTGA 777 0.3964 MQSLCVKSFVGVGNDWVNCMRRKSSNVIVACGSSKGDPMSVSTSSFVSRTQTYALLKHQMEVAAKSEDYKEAARIRDSLKLFEDEEPVLRLTRLLNEAVADQRFQDAARYRDELNKIAPHSLLKCSSEATTLGIKVQVRSVYIESRSQPSKGLYFFAYRIRITNNSDQPVQLLKRHWIITDANGKTENVRGIGVVGEQPTILPGTSFEYSSACPLSTPSGKMEGDFEMIHVDRVNSRSFNVAIAPFSLAMLGDDGSTV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0915 258 ProSiteProfiles ApaG domain profile. 128 255 IPR007474 -
Lal7g0915 258 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 51 83 IPR036876 -
Lal7g0915 258 Hamap Protein ApaG [apaG]. 127 258 IPR023065 -
Lal7g0915 258 ProSiteProfiles UVR domain profile. 85 120 IPR001943 GO:0005515
Lal7g0915 258 PANTHER OS05G0170800 PROTEIN 33 256 - -
Lal7g0915 258 Gene3D ApaG domain 124 253 IPR036767 -
Lal7g0915 258 Pfam ApaG domain 145 229 IPR007474 -
Lal7g0915 258 ProSiteProfiles UVR domain profile. 50 85 IPR001943 GO:0005515
Lal7g0915 258 Pfam UvrB/uvrC motif 90 117 IPR001943 GO:0005515
Lal7g0915 258 Pfam UvrB/uvrC motif 57 83 IPR001943 GO:0005515
Lal7g0915 258 SUPERFAMILY ApaG-like 130 250 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0915 Lal-Chr7 15621441 15625565 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0915 - K06195 gmx:100782176 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0915 7 15621441 15625565 Lal7g0915 7 15621441 15625565 ECH
Lal7g0915 7 15621441 15625565 Lal17g0910 17 7046055 7051593 PCT
Lal17g0910 17 7046055 7051593 Lal7g0915 7 15621441 15625565 PCT