Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0871 ATGCTTAATTTCAACGTCATTCACAGCATCTTCAACATTCTACTTCCCCCTCTAACCCTTACTTCACTCATTTTATCATCATATCTGTTAATCAAGAGTTTTTACTTTGTCATAAGATCAATGCTGAGTGAGAATGTTGCAGGAAAAGTCATACTCATCACTGGAGCTTCTTCAGGCATAGGCGAGCATCTAGCTTATGAGTATGGTAGAAGAGGGGCACGTCTAGCTCTTGTTGCAAGAAGAGAGAATAGACTGAAGGAGGTTGCTATCAGAGCCAAATCACTTGGATCCCCTGATGTCATTACCATCCCTGCAGATGTTTCTATTGCCCAAGACTGTAATCGATTTGTTGACTTAGCAGTTAACCACTTTGGACAATTGGATCATCTGGTGAACAATGCTGGAATACTTCCTCTCAGCTTATTTGAAGACATAACTGATATCACTAATTTTGCACCAGCAATGGAAATTAACTTCTGGGGTTCAGCATATGGTACTTATTTTGCAATCCCTCACCTAAGAAAATCTAGAGGTAAGATCATAGCCATAGCTTCCTCTGCAGGATGGTTACCTACGCCAAGAATGATGTTCTACAACTCGAGCAAAGCAGCGACGATGAGTTTTTATGAGAGCTTGAGAGTTGAACTGGGAAAGGAAATAGGAATAACAATAGTCAATCCAGGTTTGGTTGAATCAGAAATTACCCAAGGGAAGTTTCTATCCAAGGAAGGAAAAATGACTGTTGACCAAGAAATTAGAGATGTTATAGTTAGTGTGATGCCTGTAAGATCAGTGACAGGAGCTGCAAAAGCAATTGTGAATAGTGCATGCCGTGGAGATTCATATTTAACAGAACCAGGATTTCTTAAGAGTACATTTTATTGGAAGGCATTTTGCCCTGAAGTACTGGAGATTATGAACCGTTGGCTACTAATGTCAGGGTCTTCAGACAAGGGTACAATTAGCAAGAAGCTTCTTGACATGTCAGGCTTAAAGAATTACATGTATCCTGAGTCAATCAGAAATCCCAAGATCAAACGCAACTAA 1047 0.4002 MLNFNVIHSIFNILLPPLTLTSLILSSYLLIKSFYFVIRSMLSENVAGKVILITGASSGIGEHLAYEYGRRGARLALVARRENRLKEVAIRAKSLGSPDVITIPADVSIAQDCNRFVDLAVNHFGQLDHLVNNAGILPLSLFEDITDITNFAPAMEINFWGSAYGTYFAIPHLRKSRGKIIAIASSAGWLPTPRMMFYNSSKAATMSFYESLRVELGKEIGITIVNPGLVESEITQGKFLSKEGKMTVDQEIRDVIVSVMPVRSVTGAAKAIVNSACRGDSYLTEPGFLKSTFYWKAFCPEVLEIMNRWLLMSGSSDKGTISKKLLDMSGLKNYMYPESIRNPKIKRN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0871 348 PRINTS Glucose/ribitol dehydrogenase family signature 50 67 IPR002347 -
Lal7g0871 348 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Lal7g0871 348 PRINTS Glucose/ribitol dehydrogenase family signature 172 188 IPR002347 -
Lal7g0871 348 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Lal7g0871 348 PRINTS Glucose/ribitol dehydrogenase family signature 218 235 IPR002347 -
Lal7g0871 348 PANTHER RETINOL DEHYDROGENASE-RELATED 5 340 - -
Lal7g0871 348 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE 1B-LIKE ISOFORM X1 5 340 - -
Lal7g0871 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 310 IPR036291 -
Lal7g0871 348 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 IPR002347 -
Lal7g0871 348 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 186 IPR002347 -
Lal7g0871 348 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 IPR002347 -
Lal7g0871 348 Gene3D - 37 313 - -
Lal7g0871 348 Pfam short chain dehydrogenase 49 238 IPR002347 -
Lal7g0871 348 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 185 213 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0871 Lal-Chr7 15254615 15257061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0871 44 235 Acyl Lipid Metabolism Gene Families AT1G24360 30.769 1.04e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0871 K22418 - gmx:100787835 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0871 7 15254615 15257061 Lal7g0871 7 15254615 15257061 ECH
Lal14g1445 14 15603755 15606212 Lal7g0871 7 15254615 15257061 LSH