Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0046 ATGGCCACTCTTAACCCTTTTGATTTGTTGGATGATGACGTCGATGACCCCTCTCTCCTCATCGCGGCTGAGCAGCTTAAGGCTGCGGCCGCGCCGGCACCGACTCCCAAGAAGGAAAAGGCCGGTGGTCGTGGTTCTCTCACGGCGGCTCAATTACCTTCCAAACCGCTCCCACCTTCTCAGGCTGTGAGGGAGGCAAGAAATAAAACTTATAATGGCAGTCGTGGAGGTGGCCGAGGTGGACGTTGGAACGGAGGTGGCCGAGGCGGACGTGGTTATGGCCGTGACTCTCCCGATGGTGAGAACTCTTTACCTGCCTCTAGAACCCCAGCTAATCAAGGTGCTTTTGAAGGAGATGCTGGGAACCCCTCAGAAAGACGTGGTTATGGTGCACCTCGTGGGCCTTATCGTGGTGGCCGTCGGGGAGGTTTCAGCAGTGGTGAAGTTGACGAGGAAGGACGCCCACGAAGAGCATTTGAACGCCGCAGTGGAACTGGACGCGGAAATGAGGTCAAACGTGAAGGCTCTGGACGAGGGAACTGGGGATCACAGACTGATGAATCTGCTCAGGTAACTGAGGAAGGGGTGAATGAAACAGAAAAGAATTTAAGCGATGAGAAGCCTGCCAGCGATGAAGATGCTGCAGCTGAAAAGAAGGAGAATTCTGCGAATGAAAATGTAGAAAAGGAGCCTGAGGATAAGGAGATGACACTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGGAAGGCCTTAAACGCACTCAAAACTGAAGAGAGAAAGGTTGATGTTAAGGAGTTTGAATCCCTGAAGCCACTCTCAAGCAAGAGAGACAATGATGAAATCTTTGCTAAATTGGGATCTGACAAGGATAAGCGCAAAGATGCTTTTGAGAAGGAGAAATCCAAGAAGTCTGTCAGCATCAATGAGTTTCTGAAGCCTGCTGAAGGAGAGAGGTACTACAATCCTGGTGGACGAGGCAGAGGGGGGCGCGGCCGTGGTGGTTTCAGAGGCGGTTACAATGGAAATGCGAGCAGCAAAATACCAGCACCAGCAATTGAGGATCCTGGTCAATTCCCAACCTTGGGTGGTGGCAAGTGA 1101 0.5159 MATLNPFDLLDDDVDDPSLLIAAEQLKAAAAPAPTPKKEKAGGRGSLTAAQLPSKPLPPSQAVREARNKTYNGSRGGGRGGRWNGGGRGGRGYGRDSPDGENSLPASRTPANQGAFEGDAGNPSERRGYGAPRGPYRGGRRGGFSSGEVDEEGRPRRAFERRSGTGRGNEVKREGSGRGNWGSQTDESAQVTEEGVNETEKNLSDEKPASDEDAAAEKKENSANENVEKEPEDKEMTLEEYEKVLEEKRKALNALKTEERKVDVKEFESLKPLSSKRDNDEIFAKLGSDKDKRKDAFEKEKSKKSVSINEFLKPAEGERYYNPGGRGRGGRGRGGFRGGYNGNASSKIPAPAIEDPGQFPTLGGGK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0046 366 MobiDBLite consensus disorder prediction 198 237 - -
Lal7g0046 366 MobiDBLite consensus disorder prediction 27 237 - -
Lal7g0046 366 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 365 - -
Lal7g0046 366 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 365 IPR039764 GO:0003723
Lal7g0046 366 MobiDBLite consensus disorder prediction 271 307 - -
Lal7g0046 366 Pfam Stm1 1 77 IPR019084 -
Lal7g0046 366 Pfam Hyaluronan / mRNA binding family 155 262 IPR006861 -
Lal7g0046 366 Gene3D - 153 266 - -
Lal7g0046 366 SMART HABP4_PAI_RBP1_2 155 263 IPR006861 -
Lal7g0046 366 MobiDBLite consensus disorder prediction 271 366 - -
Lal7g0046 366 Coils Coil 238 261 - -
Lal7g0046 366 MobiDBLite consensus disorder prediction 144 174 - -
Lal7g0046 366 MobiDBLite consensus disorder prediction 178 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0046 Lal-Chr7 413519 417849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0046 K13199 - gmx:100791259 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0046 7 413519 417849 Lal7g0046 7 413519 417849 ECH
Lal14g0118 14 1205573 1209779 Lal7g0046 7 413519 417849 LSH
Lal7g0046 7 413519 417849 Lal19g0021 19 149781 165060 LSH
Lal7g0046 7 413519 417849 Lal2g1655 2 18923292 18928111 PCT