Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0021 ATGGCTGTTGCCACCACCACCACCGCCATCGCCACCGCCACCGTTGAACCACAGCACCAGCAGACGGTGGATCCTTCTTCTTCCTCCAGACCGTCATCTGCTTCTGCCGAAGACGCCGTTGATCGCTATGATTCTTGCAATTCCTCGCCGGATCTTCCGCGAGAGTCTGAAATTCAGTTACAGTCTACGGACCTATTGAAGAGTGAAGAGTATCGGCAGTTGTTTCATCTTCCACTAGAGGAAGTTCTTATTGAAGATTTTAATTGTGCCCTTCAGGAAAACATACTTATTCAGGGTCATATGTACCTCTTTGTCAACTTCATTTGTTTCTACTCAAACATATTTGGGTTTGAGACAAAGAGAATAATCCCATTAGCTGAAATCACAGGCGTACGGAGGGCAAAAACAGCTGGACTCTTTCCCAATGCCATTGAGATTATTGCTGGAAGCAGAAAGCATTTCTTTGCATCCTTCCTTTCCCGTGACGATGCTTTCAAGATCATTAATGATGGATGGTTGCGACAGTGTAATGGTGCCGCAGCGATTACTGAACTGCAGGAATCAATATCCGAGTTAAGCAGCCAGGAGAATGGATTTATAGCTATTGAAAATGTCAAAAGTGCTGAAATACTAGATAAAGAATCGCTTTCTTCCGAACTGAGCAAAGATACTTCTATGTGCAAAGATGTGGGGCTTCCATCCCATGTTGGAGATGACCTTGAATTGATGACCGCTCCAGAGAAGCAATCAAGTGTGATACAGGTTGCTGAACCTGTATTGAATAATGATGCCCCAAGTGTTAGTTGGAACTGGAAGGAGGAGGACATTGATGCCCCAACAATTCCAGAAGGTTATACATGTGTTGCAGAATCAGTGTTTCCGATAATGGTTGAAGACTTCTTTAAGTTCTTTTTCTCAGATGATGGTGTAAAGTTTCTCGAGTCATTCCATAAAAGATGTGGTGATAAAGACTTTGTGTGTTCTTCGTGGCATCCTCAAGAGAAATTTGTGTATGCTCGTGAACTGTCATTTCAACACCCAATCAAACTTTATCTTGGAGCAAAATTCGGTGGCTGCCATGTGGTCCAGAAATATCGAGTTTATAGGACCAGTCATTTGGTTATTGAGACCTTGCAAGATGTCACTGATGTACTTTACTCAGATTATTTTCGCGTTGAGGGACTGTGGGATATAAAAAGAGACAAGGATGAATCAAAAGAATGCTGCATTTTGCGGGTATATGTGAATGTGGCATTTTTAAAGAAAACTATTTGGAAAGGCAAAATAGTACAGGCTACAATTGAAGAATGTCGAGAAGCTTATGCCACATGGATGAACATGGCACATGAGTTGTTAAAGCAGAAAAACCTTGAAGAACAAGAAAGAGGTGCTATTGCTGTTGTAACTCAAAATGGCAAAATAAATTTTCATAGAGAAGGGACGACTGGAGAATCTTCAGAAGGGTCAATTGAGCAGATTAAGCCTACAATAGTACAACCTACGTCCAATGTATCTGATGCTACCCACAATGTTAGCACTAGTTTGCATGGGAATTTCGTTGACAGAATATCTATTCCATCTTTTTTCAAAGAGTTTGTGACAAAGTTCAGGTTGTCTTTGAAAAATCAAAGCAATCTTGCAGTGCTCCTTGTTACCATTTTCGCCCTGATTTTCTTCATGCAGCAGTTTAGCATACTTATGCTGTTGGCCAGACCTCAACAGATACATGTGAGTAGTGGTGTAGATTATATGAATAATAAGATGGGAAGTGGAATGACCACAAGTCCTTCAGACATAGCTTGGATGGAGAAAAGAATTCATCACCTTAAAGATGAGATGTACATGGTAGAGACTAGGCTTGAGAGGATGAGGTTGAAAGAGTGGAGATTAGATTCTCTGACTCTCTTGCGGTGTTATTCGGAAATGGCGACTGCTAACCCTTTTGATTTATTGGGTGATGACGTGGACGACCCATCGCAGTTGATCCTCGATGACCAACTCAAGGCTGCCACGCTGCCATCAAAGAAGGATTCTCAGCCTGTGAGGGAGGCAAGAAATGAAAATTCTTATGGCGTTCGTGGGGGTAGCCGAGGTGGCCGTGGGTATGGGGGTAGCCGAGGTGGCCGAGGTGGCCGAGGTGGTCGTAACTCTCCCAATGATGAGAACTCATTCTCTGACTCTAAAGCCCCATCTCAAGATGCTTTTCAAGAAGGTGATTCTGGGAACCCCTCAGAAAGACGTGGTTATGGTGGACCTCGTGGGCCTTATCGTGGTAGCCGTCGGGGAGGTCTCAGCAATGGTGATGTTGATGAAGGACGCCCACAAAGAACATTTGAACGCCGCAGTGGGACTGGACGCGGAAATGAATTCAAACGTGAAGGCTCTGGACGAGGGAACTGGGGATCACAGAGTGATGAATTTGCTCAGGTGACTGAGGAAGTGGTGAATGAAAATGAAAAGACTTTGAGTGATGACAAGCCTGCAGGCGAGGAGGATGCAGCAGATGGAAAGAAGGAGAGTCCTGCTAATGAAAATGCAGAAAAGGAGCCTGAAGATAAGGAAATGACACTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGGAAGGCCTTAGAAGCACTCAAAACTGAAGAGAGGAAGGTGGATGTTAAGGAGTTTGAATCCATGAAGCCACTGTCAAGCAAGAAAGACAATGATGAAATCTTTGCTAAATTGGGATCTGACAAGTATAAACGCAAGGATGCTTTCGAGAAGGAGAAATCCAAGAAGTCTGTAAGCATTAATGAGTTTCTGAAGCCTGCTGAAGGAGAGAGGCACTATGGTGGGCGTGGTCGGGGACGTGGCCGTGGTGGTTTCAGAGGAGGTTACAGTGGAAATGTAAGCCACGACGTACCAGCTCCAGCCATTGAGGATCCTGGTCAGTTCCCAACCTTGGGTGGTGGCAAGTGA 2949 0.4435 MAVATTTTAIATATVEPQHQQTVDPSSSSRPSSASAEDAVDRYDSCNSSPDLPRESEIQLQSTDLLKSEEYRQLFHLPLEEVLIEDFNCALQENILIQGHMYLFVNFICFYSNIFGFETKRIIPLAEITGVRRAKTAGLFPNAIEIIAGSRKHFFASFLSRDDAFKIINDGWLRQCNGAAAITELQESISELSSQENGFIAIENVKSAEILDKESLSSELSKDTSMCKDVGLPSHVGDDLELMTAPEKQSSVIQVAEPVLNNDAPSVSWNWKEEDIDAPTIPEGYTCVAESVFPIMVEDFFKFFFSDDGVKFLESFHKRCGDKDFVCSSWHPQEKFVYARELSFQHPIKLYLGAKFGGCHVVQKYRVYRTSHLVIETLQDVTDVLYSDYFRVEGLWDIKRDKDESKECCILRVYVNVAFLKKTIWKGKIVQATIEECREAYATWMNMAHELLKQKNLEEQERGAIAVVTQNGKINFHREGTTGESSEGSIEQIKPTIVQPTSNVSDATHNVSTSLHGNFVDRISIPSFFKEFVTKFRLSLKNQSNLAVLLVTIFALIFFMQQFSILMLLARPQQIHVSSGVDYMNNKMGSGMTTSPSDIAWMEKRIHHLKDEMYMVETRLERMRLKEWRLDSLTLLRCYSEMATANPFDLLGDDVDDPSQLILDDQLKAATLPSKKDSQPVREARNENSYGVRGGSRGGRGYGGSRGGRGGRGGRNSPNDENSFSDSKAPSQDAFQEGDSGNPSERRGYGGPRGPYRGSRRGGLSNGDVDEGRPQRTFERRSGTGRGNEFKREGSGRGNWGSQSDEFAQVTEEVVNENEKTLSDDKPAGEEDAADGKKESPANENAEKEPEDKEMTLEEYEKVLEEKRKALEALKTEERKVDVKEFESMKPLSSKKDNDEIFAKLGSDKYKRKDAFEKEKSKKSVSINEFLKPAEGERHYGGRGRGRGRGGFRGGYSGNVSHDVPAPAIEDPGQFPTLGGGK 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0021 982 MobiDBLite consensus disorder prediction 1 35 - -
Lal19g0021 982 Pfam VAD1 Analog of StAR-related lipid transfer domain 288 436 IPR031968 -
Lal19g0021 982 Pfam GRAM domain 72 172 IPR004182 -
Lal19g0021 982 Coils Coil 857 884 - -
Lal19g0021 982 MobiDBLite consensus disorder prediction 817 856 - -
Lal19g0021 982 MobiDBLite consensus disorder prediction 797 816 - -
Lal19g0021 982 MobiDBLite consensus disorder prediction 764 793 - -
Lal19g0021 982 SMART gram2001c 69 135 IPR004182 -
Lal19g0021 982 Pfam Stm1 642 695 IPR019084 -
Lal19g0021 982 ProSiteProfiles VASt domain profile. 284 456 IPR031968 -
Lal19g0021 982 SMART HABP4_PAI_RBP1_2 774 882 IPR006861 -
Lal19g0021 982 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 19 625 - -
Lal19g0021 982 MobiDBLite consensus disorder prediction 936 982 - -
Lal19g0021 982 CDD PH-GRAM_GRAMDC 80 172 - -
Lal19g0021 982 Pfam Hyaluronan / mRNA binding family 774 881 IPR006861 -
Lal19g0021 982 MobiDBLite consensus disorder prediction 716 739 - -
Lal19g0021 982 Gene3D - 67 175 IPR011993 -
Lal19g0021 982 Gene3D - 772 885 - -
Lal19g0021 982 MobiDBLite consensus disorder prediction 1 54 - -
Lal19g0021 982 MobiDBLite consensus disorder prediction 670 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0021 Lal-Chr19 149781 165060 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0021 - - gmx:100805910 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0021 19 149781 165060 Lal19g0021 19 149781 165060 ECH
Lal14g0118 14 1205573 1209779 Lal19g0021 19 149781 165060 LSH
Lal7g0046 7 413519 417849 Lal19g0021 19 149781 165060 LSH
Lal19g0021 19 149781 165060 Lal2g1655 2 18923292 18928111 PCT