Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1666 ATGAACCAAAAGAGAATGATGCATTACCAAGTAGAAGCATCTTCATGGGGCTACTACATGAGAGTGAAAAGCATGGAAGATGAAATGGAAAGAGTGGTGAAGTTAGCATCAAAAAGTGCTGTAGTAATATTCAGCATAAGTAGTTGTTGCATGTGCCATGCAATGAAGAGATTATTTTGTGGTATGGGTGTTAACCCTAAAGTGGTTGAGTTAGATGAAGATCCAAAAGGGAAAGAAATGGAGAAAGCATTGATAAGGTTGATAGGGAATAATGCATCAAATAATAATGCAGTAGTAGTTCCTGTTGTGTTCATTGGAGGGAAACTTGTTGGAACAATGGATAGGGTTTTGGCTTCTCATATTAATGGCACTTTAGTTCCACTTCTCAAAGAAGCTGGAGCTTTGTGGCTTTAG 414 0.3816 MNQKRMMHYQVEASSWGYYMRVKSMEDEMERVVKLASKSAVVIFSISSCCMCHAMKRLFCGMGVNPKVVELDEDPKGKEMEKALIRLIGNNASNNNAVVVPVVFIGGKLVGTMDRVLASHINGTLVPLLKEAGALWL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1666 137 CDD GRX_GRXh_1_2_like 40 128 - -
Lal6g1666 137 TIGRFAM GlrX-like_plant: glutaredoxin-like family 32 137 IPR011905 -
Lal6g1666 137 PANTHER GLUTAREDOXIN-C1 PROTEIN 6 136 - -
Lal6g1666 137 ProSiteProfiles Glutaredoxin domain profile. 29 136 - -
Lal6g1666 137 Gene3D Glutaredoxin 21 136 - -
Lal6g1666 137 PANTHER GLUTAREDOXIN 6 136 IPR011905 -
Lal6g1666 137 SUPERFAMILY Thioredoxin-like 29 136 IPR036249 -
Lal6g1666 137 Pfam Glutaredoxin 41 110 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1666 Lal-Chr6 19436183 19436596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1666 7 137 Miscellaneous Gene Families AT3G02000 56.429 2.55e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1666 K03676 - gmx:100797942 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1666 6 19436183 19436596 Lal6g1666 6 19436183 19436596 ECH
Lal18g0583 18 4962928 4963338 Lal6g1666 6 19436183 19436596 LSH