Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0583 ATGTCTTCTATGAATTCTATGAATCAAGAGAGAATGATGCATTACCAAATGGAGCCATCATGGGGCTACTACATGAGGGTGAGGAACATGGAGGACCAAATGGAGAGAGTGATAAGGTTAGCATCTCAAAGTGCTGTAGTCATATTTAGCATTAGTAGCTGTTGCATGTGCCATGCATTGAAGACACTCTTCTGTGGAATGGGTGTTAACCCAAGTGTAGTTGAGTTAGATGAAGATCCAATGGGGAAAGAAATGGAGAGAGAATTGATGAGGCTTCTTGGAAACTCAACTTCTGTTCCTGTGGTTTTCATTGGAGGGAAGCTAGTTGGAACAATGGATAGGGTTTTGGCTTCTCATATCAATGGCACTCTTGTTCCACTTCTCAAAGAAGCTGGTGCTATGTGGCTTTAG 411 0.4234 MSSMNSMNQERMMHYQMEPSWGYYMRVRNMEDQMERVIRLASQSAVVIFSISSCCMCHALKTLFCGMGVNPSVVELDEDPMGKEMERELMRLLGNSTSVPVVFIGGKLVGTMDRVLASHINGTLVPLLKEAGAMWL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0583 136 ProSiteProfiles Glutaredoxin domain profile. 34 135 - -
Lal18g0583 136 Pfam Glutaredoxin 46 109 IPR002109 -
Lal18g0583 136 PANTHER GLUTAREDOXIN-C1 PROTEIN 12 135 - -
Lal18g0583 136 TIGRFAM GlrX-like_plant: glutaredoxin-like family 38 136 IPR011905 -
Lal18g0583 136 Gene3D Glutaredoxin 27 135 - -
Lal18g0583 136 CDD GRX_GRXh_1_2_like 45 127 - -
Lal18g0583 136 PANTHER GLUTAREDOXIN 12 135 IPR011905 -
Lal18g0583 136 SUPERFAMILY Thioredoxin-like 34 135 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0583 Lal-Chr18 4962928 4963338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0583 13 136 Miscellaneous Gene Families AT3G02000 55.797 1.31e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0583 K03676 - qsu:111995961 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0583 18 4962928 4963338 Lal18g0583 18 4962928 4963338 ECH
Lal18g0583 18 4962928 4963338 Lal6g1666 6 19436183 19436596 LSH