Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0984 ATGTCCACTATGAAGAACCATCACAAAGATCCAGAACACCTTTTTTACTCTTCATGGACCTTTTCAAAGCTAATGGCTTTCTTTTTTCTCTTAATCTCAATCTCATACCTCTTCTATTCCCTTAGATTTGTTAGCCATTCATATGATTGTGACCAAAACCCCCACATTTCAATCTCCCATCTTTCAGAAGCCACCACTGTAAGCACTTCTTCAGTAGAAGAAGAACAAAGAGATACCCCAAAAGAACAAGCCTTTGAAAAAACCAACATTTCACACATAGTGTTTGGTATAGGAGCTTCAGCTAAGTTATGGAAGCAAAGGAAAGAGTACATAAAACTTTGGTGGAAGCCAAATGAAATGAGGGGTATAGTGTGGTTGGAACAAAAGGTGAAAACTGAGGCTAATGATGAGAATCTATTACCCCCTTTGAAGATCTCAGAAGACACTTCAAAGTTCAAGTACAAGAACTCAAAGGGCCATAGATCAGCCATAAGGATTTCAAGGATAGTGTCTGAGACACTGAGGCTTGGAATGGAAGGTGTAAGGTGGTTTGTTATGGGAGATGATGACACAGTTTTTGTTACTGAGAATTTGGTTAAGGTTTTGCAGAAATATGATCATAATCAGTTTTATTATATTGGTAGTTCTTCTGAGAGTCATTTGCAGAATATATACTTTTCTTATAATATGGCTTATGGTGGTGGTGGTTTTGCTATTAGTTATCCTTTGGCTGTGGCATTAGAGAAAATTCAGGATAGGTGCATTCAGAGGTACCCTGGTTTGTATGGATCTGATGATAGGATTCAAGCTTGTATGGCTGAACTTGGTGTTCCACTCACCAAGGAAAGAGGGTTTCATCAGTTTGATGTGTATGGAAATCTCTTCGGCCTCCTAGCAGCCCATCCCGTCGCGCCATTGGTGTCTCTCCATCACCTGGATGTGGTTGAGCCGATATTTCCAAATGTGAGTCGTGTCCAAGCCTTAAAGCGCCTCAAGGTGCCCATGAAACTGGACCCTGCCGGGCTCATGCAGCAATCGATTTGCTATGACAAAACCCGGACTTGGACCATATCCGTGTCTTGGGGATACGCAGTTCAAATATTCCGGGGCATTTTCTCCGCCAGGGAGATGGAAATGCCAGCTAGAACTTTCCTTAACTGGTACAAGCGAGCCGATTATACCGCTTATTCATTCAACACTCGCCCAGTCAGCCGAAATGTTTGCCAGAAACCATTTGTTTATCACCTGTCTAATGCAATTCATAACAAGGGTACAAATGAGACTACGAGTCGCTATGTTCGGACTCAACCAAACCCGGCTTGCAAGTGGAAAATGGCAGATCCAGCCCAAATCACATTAGTAGAGGTTCACAAGAAACCTGACCTACATTTGTGGGACAAGTCTCCAAGAAGAAATTGTTGTAGGGTTCAAAGAACAAAGATGAAAGGAACAATAGTGATTGATGTTGGGGAATGCAAGGAAGATGAAGTTGTTGAATTGTAA 1503 0.4185 MSTMKNHHKDPEHLFYSSWTFSKLMAFFFLLISISYLFYSLRFVSHSYDCDQNPHISISHLSEATTVSTSSVEEEQRDTPKEQAFEKTNISHIVFGIGASAKLWKQRKEYIKLWWKPNEMRGIVWLEQKVKTEANDENLLPPLKISEDTSKFKYKNSKGHRSAIRISRIVSETLRLGMEGVRWFVMGDDDTVFVTENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKIQDRCIQRYPGLYGSDDRIQACMAELGVPLTKERGFHQFDVYGNLFGLLAAHPVAPLVSLHHLDVVEPIFPNVSRVQALKRLKVPMKLDPAGLMQQSICYDKTRTWTISVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYSFNTRPVSRNVCQKPFVYHLSNAIHNKGTNETTSRYVRTQPNPACKWKMADPAQITLVEVHKKPDLHLWDKSPRRNCCRVQRTKMKGTIVIDVGECKEDEVVEL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0984 500 Pfam Protein of unknown function, DUF604 222 474 IPR006740 -
Lal6g0984 500 Gene3D - 79 337 - -
Lal6g0984 500 PANTHER FRINGE-RELATED 1 499 - -
Lal6g0984 500 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0984 Lal-Chr6 6986743 6991804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0984 22 494 Glycosyltransferase AT5G41460 65.849 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0984 - - gmx:100789583 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0984 6 6986743 6991804 Lal22g0875 22 6784192 6789437 LSH
Lal6g0984 6 6986743 6991804 Lal6g0984 6 6986743 6991804 PCT
Lal6g0984 6 6986743 6991804 Lal22g0875 22 6784192 6789437 PCT
Lal22g0875 22 6784192 6789437 Lal6g0984 6 6986743 6991804 PCT