Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0875 ATGAACAAAATTCCCAAAGACCCAGAACACCTTTTTTATTCTTCATGGACCTTTTCAAAGTTAATGGTTTTATTTTTTCTCTTAATTTCAATCTCATACCTTTTCTATTCTCTTAGATTTGTTAGCCTTTCATATGATTGTAACCAAAACCAAAATACCCACATTTCAATAACTCATGTATCAGACACCACAACCACCACTTCTAAAGTAGTAGAACAAGAGAGAAAGACACCAGAAAAACAAGCATTTGAAGAAACCAACATTTCTCATATAGTGTTTGGTATAGGAGCGTCAGCTAAGCTATGGAAGAAAAGAAAAGAGTACATAAAACTATGGTGGAAGCCAAATGAAATGAGGGGCATAGTGTGGCTTGAACAGAAAGTGAAAACTAAGTCTAGTGATAAGAATTTATTACCTCCTTTGAAGATCTCAGAAGACACTTCAAGGTTCAAGTACAAAAACTCACAGGGTCATAGATCAGCAATAAGGATTTCAAGGATAGTGTCAGAGACAGTGAGGCTTGGGATGAAAAATGTGAGGTGGTTTGTGATGGGGGATGATGACACAGTTTTTGTGACTGAGAATTTGGTTAGGGTTTTGAAGAAATATGATCATAAACAGTTTTATTATATTGGAAGCAGTTCTGAGAGTCATTTGCAGAATATATATTTTTCTTATAATATGGCTTATGGTGGTGGAGGTATTGCTATAAGTTATCCTTTGGCTTTGGCTTTGGAGAAAATTCAGGATAGATGCATTCAGAGGTACCCTGGATTATATGGATCTGATGATAGGATTCAAGCTTGTATGTCTGAGCTTGGAGTTCCACTCACTAAGGAAAGAGGGTTTCATCAGTTTGATGTATACGGCAATCTCTTTGGACTTCTAGCAGCACACCCAGTGACACCATTAGTATCCCTCCATCACCTTGATATAGTGCAACCAATATTTCCAAATATGACTCGGATCCATGCCCTAAAACAACTCAAGGTGCCCATAAAACTAGACCCTGCAGGGATCATGCAACAATCCATTTGCTACCACAATACTCATAAATGGACCATATCAGTGTCTTGGGGATATGCAGTTCAAATATTCAGAGGCATTTTCTCAGCTCGAGAGATCGAAATTCCGGCGCGAACGTTTCTTAATTGGTACAAGCGAGCTGATTATACTGCATTTCCTTTTAACACACGCCCTGTGAGCAAGCATGTTTGTCAGAAACCATTTGTTTATCACTTATCTAATGCATTGTATAAGAAGGTTAAGAATGAGACTATGACCTTCTATGTTCGAACTCAACGAAACCCTTCTTGCAAATGGAAAATGGCAGATCCAACTCAAATCAGAGTGGTAGAGGTTCATAAGAAACCTGACCCGCATTTGTGGGATAAGTCTCCAAGGAGAAATTGTTGCAGGGTCCAAGGAACAAAGAAAAAAGGGACAATGGTGATTGATGTTGGGGAATGCAGGGAAGATGAAATTATTGAATTGTAA 1497 0.3828 MNKIPKDPEHLFYSSWTFSKLMVLFFLLISISYLFYSLRFVSLSYDCNQNQNTHISITHVSDTTTTTSKVVEQERKTPEKQAFEETNISHIVFGIGASAKLWKKRKEYIKLWWKPNEMRGIVWLEQKVKTKSSDKNLLPPLKISEDTSRFKYKNSQGHRSAIRISRIVSETVRLGMKNVRWFVMGDDDTVFVTENLVRVLKKYDHKQFYYIGSSSESHLQNIYFSYNMAYGGGGIAISYPLALALEKIQDRCIQRYPGLYGSDDRIQACMSELGVPLTKERGFHQFDVYGNLFGLLAAHPVTPLVSLHHLDIVQPIFPNMTRIHALKQLKVPIKLDPAGIMQQSICYHNTHKWTISVSWGYAVQIFRGIFSAREIEIPARTFLNWYKRADYTAFPFNTRPVSKHVCQKPFVYHLSNALYKKVKNETMTFYVRTQRNPSCKWKMADPTQIRVVEVHKKPDPHLWDKSPRRNCCRVQGTKKKGTMVIDVGECREDEIIEL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0875 498 Gene3D - 77 338 - -
Lal22g0875 498 Pfam Protein of unknown function, DUF604 220 472 IPR006740 -
Lal22g0875 498 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 496 - -
Lal22g0875 498 PANTHER FRINGE-RELATED 1 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0875 Lal-Chr22 6784192 6789437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0875 19 492 Glycosyltransferase AT5G41460 63.061 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0875 - - gmx:100789583 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0984 6 6986743 6991804 Lal22g0875 22 6784192 6789437 LSH
Lal6g0984 6 6986743 6991804 Lal22g0875 22 6784192 6789437 PCT
Lal22g0875 22 6784192 6789437 Lal6g0984 6 6986743 6991804 PCT