Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0961 ATGCAAAGGTATCATGCTGGCAGCTGCGCTAGTGCAGTTAATAACAGTGTAGTAGGTGGTCCATCTCCTAGGGACAGTGGACGATCTGATTTATCTTCTTTGCCAGCTAATTTCCCTTTAAATTCAAGGCGACAACAACCACAGTTTGCCCCCTACAAGTTAAAGTGTGATAAAGAACCTTTAAACTCTAGGCTTGGGGTACCAGACTTTAATCCCCAAACACCAAATTGCCCAGAGGAAACTCTGACCAGGGAATATTTGCAATCTGGATATAGGGATACCATCGAGGGACTTGAGGAAGCTAGAGAAATTTCACTGACCCAGGTTCCAAATTTTAACAAGACAACTGTTCTTAATTGTAAAGAGGCCATTAGAAAATGTCTAAGGGCCATCAATAAATCTCGTGCTCAGAAGAGGAAGGCTGGTCAAGTATACGGGGTGCCTCTTTCAGGATCACAACTTGCTAAGCCTGGTATTTTCCCAGAACTAAGGCCATGTGGTGAAGACTTCCGGAAGAAATGGATTGAGGGCTTATCTCAACCACACAAACGATTACGCTCTTTGGCTGATCAAGTTCCTCATGGTTATAAAAGGACATTACTCTTAGATGTTCTTATCAGGAATAATGTTCCGTTGCTGAGGGCCACTTGGTTTATAAAGGTTATTTACCTCAATCAGGTTCGACCTGGTTCTGTTGGTATTTCTTCTGGGACTGCTGACAAAATACAGCTGTCCCGTTCTGAGGTTTGGTCCAAAGATGTTATCAATTACTTGCAGACTCTTCTGGATGATTTTTTCTCAAAAAATACTTCTCATTCTACTCCGCGTTCTACTCATACTCGAGAGCGATCACTACAAATGCCTTATACTGTATCAATGCAGCACAAAAGTGATCCGTTATTATCTGTTTCTGATGATGAGCCATCCTTACATTTTAGATGGTGGTATATTGTACGGCTTCTGCAATGGCATCATGCTGAAGGACTGCTTCTTCCTTCCCTTGTCATTGATTGGGTTTTTAGTCAATTACAGGAAAATCTGCTTGAGGTTTGGCAGCTGTTATTGCCTATTATATATGGCTTTTTAGAAACTGTTGTTCTGTCTCAAAATTATGTCCGCACTCTTGCTGGAATAGCTCTTCGTGTCATTTGTGATCCTGCTCCAGGTGGATCCGATCTAGTAGATAACTCCCGGAGGGCATATATGATTTATGCTCTGAATGAATTGCTCAGGTATTTGATACTTGCAGTGCCAGATGCTTTTGTTGGTTTGGATTGCTTTCCTTCGCCATTGTCTGTGATTTCACATACGATGAGTGATGGGAATTTTGTACTAAAATCAACTGAAGCTGCAGGCAAGATAAAAAATGGTAGAGATGATTTTGGTTACGTTTTTTCAAGCATTCATAAAAATGCAGAATATCTGGCAAAGGCTGCAAGCCCAGGCTATCCAGGTTGTTGTCTTGCTAAAGTTGCAAAACTTTTGGATAAATCTCTTGTGCTGGGAGATTTACATGGAGCATATAAATTTCTTTTTGAAGATCTTTGTGATGGAACTGTATCTGATGGTTGGGTTGCTAAAGTCAGCCCTTGCTTAAGGTTATCACTGAAATGGTTTGAGACTGTAAGTTTGTCGCTGATATATTCAGTGTTTTTCCTTTGCGAGTGGGCAACATGTGACTTCAGGGATTTTCGTACTACTCCTCTGTGTGACATAAAGTTTACTGGTAGGAAAGATCTTTCCCAAGTGCATATAGCTGTCAGACTTTTAAAGATGAAGATGAGGGAAATGAAGATTTCACCAAGACTAACCAATGGGAGAAATCAGAGAATTAGTCGCGTAGCAAAATGTTCAAATCAACAGCAGCATAATCAGAATCATTTGGGTAATGCATCCAGATTAAAATCTAGTTCAAAATGTGTGGGCTGGAGTATATTTGAAAGCCCAGGTCCTCTCCATGATATTATAGTTTGTTGGATTGATCAGCATGTGATGCATAAAGGGGAAGGTTACAAACGCCTGCATCTGTTTATAGTGGAACTTGTTCGTGCAGGCATCTTTTACCCCATAGCATATGTTCGTCAGCTGATAGTGAGTGGGATCATGAATATGAATGTAAATGTGGTTGACCTGGGGCGGAAGAAGAGGCATTATCACATCTTGAAGCAGCTTCCTAGGTGCTTTATGCACGAGGCTTTGGAAGAATCAGGAATTGTTGAAGGGCCACAGCTTGACAAAGCTGTGCAAACTTACTTGAATGAACGTCTCCTCATACTTGGTGGTGTTCTAAGGGAGCATCGGGATGATGGCAGTATATCTGCTAAGAAGCGAAAGCAATATCCAGCTTCTGCAAAGAATGGAGCTTCTACAGTGTCAGCTGATCAATGGGAAATGATTCTTACTAACACAATATCTTCTAAAAGTGCAAAGGATGATGTTAACGTTGAGGAACTGAAAGCAGACATCGTGCTAATACTAAAGCTACCTAATAGCCTATCCAATTTGAGCACTGCAGGATGTGACGATTCTGAAGGAAGTATTAGAAGACCTGTCTGGTCCCATCACAGCAAGATTGATCCAGTGGAGGGTACACCTGGGTGTGAAGAATGTAGAAGAGCGAAGAGACAGAAAAAAAGTGAGGAAAGATGCTCATTTGTTCAAGGTCATTCTGCAGTTGTACCTGATGATGATGATGATGCCTGGTGGGTAAAGAAGGGGCTGAAATCCTCAGAGCCTCTCAATATTGAACAACCATCAAAGTCAACCAAGCAAGTTACTAAGACTCGACAGAAGAATGTGCGTAAGACTCAGAGTCTTGCTCAACTGCAAGCTTCTAGAATTGAGGGTAGCCAAGGGGCATCAAGTAGTCATGAGTGCAATAATAAGGTAAGCTGTTCTCACCGTAGAGCTACTTTAGATGGAGATAAGCTGAGATATGTGGATAGCCGAACATGTCGTCGTGGGGATATTGTTTCCATTGGAAAAGCACTGAAGCGGCTTCGCTTTGTTGAGAAAAGGGCTATCACAATTTGGTTGATGACTGTTGTTAAGCAGGTTGTTGAACAGAATGAAAACAATGTTGGTAAAGTTGGTCAGTTTAGCAGGCCCTTTTCTACTGTGGATGATAGAAGCTCTTTACAGTGGGAACTTGGTGAGGATGAACTTTCTTCGATACTTTATCTTATGGATATATCTGATGATTTAGTTGCGGCTGCCAAGTTCCTCATCTGGTTGCTGCCAAAGGTTCTTAATAGTTCCAATTCAACTATTCAGAGTGGGAGGAATGTTCTGATGCTGCCAAGGAATGTGGAAAACCAAGTTTGTGATGTAGGAGAAGCTTTTCTGATATCATCACTGAGACGGTATGAGAACATTCTTGTTGCAGCAGACCTTATTCCTGAAGCTTTGTCTTCTATAATTTACCGTGCTGCAGCTATTATAACATCTAATGGAAGAGTTTCAGGTTCAGGATCCCTGGTGTTTGCTCGGTATTTACTGAAAAAATACAGCAACGTGGCTAGTGTCAGTGAGTGGGAGAAAACTTTTAAGGCTACAAGTGATGCAAGACTTTCCTCCGAACTCGAGTCTGGACGATCTGTGGATGGGGAGTTAGGGTTACCCCTTGGAGTTCTTGTAGGAGTTGAGGACCTTGATGATTTCTTTCGCCAAAAGATAAGTGGTAGCCGGTTACCATCCAGATTAGGTTCAGGCATGAGAGACATAGTTCAGCGGAATGTTGATGAAGCATTTCGCTATTTCTTTGGCAAAGATAGAAAGGTCATTGCTGCTGGGGGTACACCAAAAGGTCCTGCTTTAGAAAAATGGGATAATGGATATCAAATTGCTCAACATATTGTTATGGGTTTGATTGACTGCATAAGGCAGACCGGTGGTGCTGCTCAAGAAGGGGATCCCTCTTTGATCTGTTCTGCTGTTTCTGTGATCGTTAGCAGTGTTGGTCCAACTTTAGCAAAAATCCCTGATTTTCCATCTGGCAGTAATCATTCAAATACAACGTTGGCTTCAACTTCATTGAACTACGCGAGATGCATTCTGCGAATGCATATAACCTGTCTCTGCCTGCTTAAGGAAGCCCTGGGAGAACGGCAAAGCCGTCTATTTGACGTTGCTCTTGCAACAGAAGCATCTGCTGCTATTGCTGGCGTTTTTGCTCCTAGTAAAGCATCTCGAGCTCAGTTTCAATTGTCTCCTGAAGCACATGATTCCAGTACTATTCCAAATGATGTGGGAGGCAACTCTAGTAAAGTTGTGGTTGCAAGAACAACAAAAATTGCTGCTGCTGTTTGTGCACTTGTTGTTGGTGCAGTTATATACGGTGTTACCAGCCTGGAAAGAATGGTAACAGTTCTCAGATTGAAGGAGGGCCTGGATGTTGTTCAATTTGCAAGAAGCACAAGATCCAGTTCAAATGGAAATGCACGTTCGATCGGGGCTTTTAAGGTGGATAGTTCAATTGAAGTTCATCTGCATTGGTTTAGGTTGCTTGTTGGAAACTGCAGAACCGTTTGTGAAGGATTAGTGGTGGAACTCTTGGGTGAACCATATATTATAGCTCTTTCAAGGACGCAGCGTATGCTTCCTCTCAGTTTGGTCTTTCCACCTGCCTATCAAATTTTTGCATTTGTTAAGTGGTGGCCCTTCATTCTGAATCCTAATGTTGCAGTTCGTGAAGATATGAATCAACTTTATCAGTCTCTAACTATAGCAATATCCGATGCTATAAAACATTTGCCTTTTCGAGATGTATGTTTTCGGGACAGTCAGGGCCTTTATGATCTTATGGCTTCAGATCCAAGTGACACTGAATTTGCAAACTTACTAGAGGTGAGTGGCTCCGATATGCATTTGAAATCCATGGCATTTGTTCCTCTCCGTTCTAGGCTCTTCCTAAATGCTATGATTGATTGTGAGATGCCACAATCTATTTATACAAAGGATGAAGGTAACAGGCTTTCTGGACCTGGTGAATCTAAGCTTAAGGATATGCTTGTGCATGTCTTGGATACCTTGCAACCTGCCAAATTTCACTGGCAGTGGATTGCACTGAGATTGCTTTTAAATGAGCAAGCCCTCATTGAAAAACTAGAGACACATGACGTGTCCTTGGCTGAGGCTATACAGTTGTCCTCGCCTAATCCAGAGAAGTCTACTGCCGCTTCTGAGAATGAGAACAACTTTATTGAAATACTTCTCACAAGATTACTGGTTAGACCTGATGCTGCACCCCTTTTCTCGGAGTTGGTTCATCTTATTGGTAAGCCACTAGAGGATTCAATGTTGCTGCAAGTTAAATGGTTTCTTGGAGGCCAGGATGTCCTCTTTGGTCGGAAGACTATTAGACAAAGGCTACATAATATTGCCGAGAGTAGAGAACTTTCTGTTAAGACTCAATTTTGGGAGCCTTGGGGTTGGTGTAGCCCATGTACTGACCCAGCAACTATTAAGGGGGACATAAAGAAGTTTGATACTGCATTTCTTGAAGAAGGTGAAGTTGTTGAAGAGGGAACGGATCCGAAAAGGTGCCTGAAGGGGTCTTCTCAAGTGTTGGACTCAGAATGCTCAAGCATTAACCAACTTCAAGTTACTGAGAGGGCTCTTATTGAGTTACTTCTTCCTTGCATAGATCAAAGCTCTGATGAGTCCCGCAGTTCTTTTGCAAATGATTTAATCAAACAGTTAAATGCTATTGAGCAACAAATAACTGCTGTTACACATGGGACAAGTAAGCCAGTGGGAAATACTCCACCTGGACTTGAAGGTCAGACAAATAAAGTAAATAACCGCAGAACTATAAAAGGTGGCAGCCCTGGATTAACTAGACGAGGAAATGTTGCAACAGACTCTTCTCCACCTTCTCCTGCAGCCCTACGAGCTTCTATGTCATTACGTTTGCAGTTACTCTTGAGATTCCTTCCTATTCTTTGCATCGACAGGGAGCCATCTCTGCGGAACATGAGACATGCACTTTCCCCCATAATTTTGCGTTTCCTTGTTAGCCGGGTTGTGCATGTGGATGCAGACATTTCCATGCATTGTTCTCTGATGAGGAGGGAGGTGGAGTCATCTTCTGAAGCTGCTTCTGCTGCATTTGTAGATTCTTCTGCTGAGGGTCTGTTTGATCTTTTGTTGTTGGTTTTGCATGTGTTGTTAAGTAATTATCCTCCAAGTTGGCTAAGGCAGAAACCTGTTTTAAAGACCATCACTGAACATATGAGGGAATTTTATGGATTTGACCGAGAGATTTTGGAGACTATGCAGAATGATTTGGATCGTATGCAACTGCCAGAGACTATCAAGTGGCGTATCCAAGCTGCAATGCCCATACTCTTTCCCAATACGCGGTTCTCTTTCTCCTGCCAGCCGCCACATGTTCCAGTTTCTGCTGTTTCATGTCTTCAACAAAGCACCACAAATCCTGGGTTTAAGTCCAGTAGTTCAACTGCCCCTCAGAGGAATCTGGTTCCATTATCAAGAACTGCAACTAGTAAACCAGAAAAGGCAAAACAACAGGACAATGACTTTGAAGTTGATCCTTGGATGCTTCTAGAAGACGGTGCTGGGTCTTTCCCATCTGCAAGTAATGCTGCTAGCATAGGAAGTGGCGACCATGTTAACATTCGAGCTGCCAGCTGGCTTAAAGGGAGCATAAGGGTGAGGCGGACAGACCTGACATATGTTGGTGCTGTTGATGACGATAGCTGA 6723 0.4254 MQRYHAGSCASAVNNSVVGGPSPRDSGRSDLSSLPANFPLNSRRQQPQFAPYKLKCDKEPLNSRLGVPDFNPQTPNCPEETLTREYLQSGYRDTIEGLEEAREISLTQVPNFNKTTVLNCKEAIRKCLRAINKSRAQKRKAGQVYGVPLSGSQLAKPGIFPELRPCGEDFRKKWIEGLSQPHKRLRSLADQVPHGYKRTLLLDVLIRNNVPLLRATWFIKVIYLNQVRPGSVGISSGTADKIQLSRSEVWSKDVINYLQTLLDDFFSKNTSHSTPRSTHTRERSLQMPYTVSMQHKSDPLLSVSDDEPSLHFRWWYIVRLLQWHHAEGLLLPSLVIDWVFSQLQENLLEVWQLLLPIIYGFLETVVLSQNYVRTLAGIALRVICDPAPGGSDLVDNSRRAYMIYALNELLRYLILAVPDAFVGLDCFPSPLSVISHTMSDGNFVLKSTEAAGKIKNGRDDFGYVFSSIHKNAEYLAKAASPGYPGCCLAKVAKLLDKSLVLGDLHGAYKFLFEDLCDGTVSDGWVAKVSPCLRLSLKWFETVSLSLIYSVFFLCEWATCDFRDFRTTPLCDIKFTGRKDLSQVHIAVRLLKMKMREMKISPRLTNGRNQRISRVAKCSNQQQHNQNHLGNASRLKSSSKCVGWSIFESPGPLHDIIVCWIDQHVMHKGEGYKRLHLFIVELVRAGIFYPIAYVRQLIVSGIMNMNVNVVDLGRKKRHYHILKQLPRCFMHEALEESGIVEGPQLDKAVQTYLNERLLILGGVLREHRDDGSISAKKRKQYPASAKNGASTVSADQWEMILTNTISSKSAKDDVNVEELKADIVLILKLPNSLSNLSTAGCDDSEGSIRRPVWSHHSKIDPVEGTPGCEECRRAKRQKKSEERCSFVQGHSAVVPDDDDDAWWVKKGLKSSEPLNIEQPSKSTKQVTKTRQKNVRKTQSLAQLQASRIEGSQGASSSHECNNKVSCSHRRATLDGDKLRYVDSRTCRRGDIVSIGKALKRLRFVEKRAITIWLMTVVKQVVEQNENNVGKVGQFSRPFSTVDDRSSLQWELGEDELSSILYLMDISDDLVAAAKFLIWLLPKVLNSSNSTIQSGRNVLMLPRNVENQVCDVGEAFLISSLRRYENILVAADLIPEALSSIIYRAAAIITSNGRVSGSGSLVFARYLLKKYSNVASVSEWEKTFKATSDARLSSELESGRSVDGELGLPLGVLVGVEDLDDFFRQKISGSRLPSRLGSGMRDIVQRNVDEAFRYFFGKDRKVIAAGGTPKGPALEKWDNGYQIAQHIVMGLIDCIRQTGGAAQEGDPSLICSAVSVIVSSVGPTLAKIPDFPSGSNHSNTTLASTSLNYARCILRMHITCLCLLKEALGERQSRLFDVALATEASAAIAGVFAPSKASRAQFQLSPEAHDSSTIPNDVGGNSSKVVVARTTKIAAAVCALVVGAVIYGVTSLERMVTVLRLKEGLDVVQFARSTRSSSNGNARSIGAFKVDSSIEVHLHWFRLLVGNCRTVCEGLVVELLGEPYIIALSRTQRMLPLSLVFPPAYQIFAFVKWWPFILNPNVAVREDMNQLYQSLTIAISDAIKHLPFRDVCFRDSQGLYDLMASDPSDTEFANLLEVSGSDMHLKSMAFVPLRSRLFLNAMIDCEMPQSIYTKDEGNRLSGPGESKLKDMLVHVLDTLQPAKFHWQWIALRLLLNEQALIEKLETHDVSLAEAIQLSSPNPEKSTAASENENNFIEILLTRLLVRPDAAPLFSELVHLIGKPLEDSMLLQVKWFLGGQDVLFGRKTIRQRLHNIAESRELSVKTQFWEPWGWCSPCTDPATIKGDIKKFDTAFLEEGEVVEEGTDPKRCLKGSSQVLDSECSSINQLQVTERALIELLLPCIDQSSDESRSSFANDLIKQLNAIEQQITAVTHGTSKPVGNTPPGLEGQTNKVNNRRTIKGGSPGLTRRGNVATDSSPPSPAALRASMSLRLQLLLRFLPILCIDREPSLRNMRHALSPIILRFLVSRVVHVDADISMHCSLMRREVESSSEAASAAFVDSSAEGLFDLLLLVLHVLLSNYPPSWLRQKPVLKTITEHMREFYGFDREILETMQNDLDRMQLPETIKWRIQAAMPILFPNTRFSFSCQPPHVPVSAVSCLQQSTTNPGFKSSSSTAPQRNLVPLSRTATSKPEKAKQQDNDFEVDPWMLLEDGAGSFPSASNAASIGSGDHVNIRAASWLKGSIRVRRTDLTYVGAVDDDS 2240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0961 2240 MobiDBLite consensus disorder prediction 2145 2178 - -
Lal6g0961 2240 MobiDBLite consensus disorder prediction 1913 1959 - -
Lal6g0961 2240 MobiDBLite consensus disorder prediction 912 938 - -
Lal6g0961 2240 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 2240 - -
Lal6g0961 2240 MobiDBLite consensus disorder prediction 7 44 - -
Lal6g0961 2240 MobiDBLite consensus disorder prediction 2145 2170 - -
Lal6g0961 2240 MobiDBLite consensus disorder prediction 1 44 - -
Lal6g0961 2240 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1 2240 - -
Lal6g0961 2240 SMART Med12_2 159 220 IPR019035 GO:0003712|GO:0006357|GO:0016592
Lal6g0961 2240 MobiDBLite consensus disorder prediction 1913 1940 - -
Lal6g0961 2240 Pfam Transcription mediator complex subunit Med12 161 220 IPR019035 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0961 Lal-Chr6 6680229 6693193 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0961 - - gmx:100782672 3258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0961 6 6680229 6693193 Lal6g0961 6 6680229 6693193 ECH
Lal6g0961 6 6680229 6693193 Lal22g0839 22 6285894 6299683 LSH
Lal6g0961 6 6680229 6693193 Lal18g0736 18 8607618 8622962 LSH