Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0839 ATGCAAAGGTATCATGCTGGCAGCTGCACTAGTGCAGTTAATAACAGCGCAATAGGTGGGCCGTCCTCTAGGGACACCGGAAGACCGGATTCATCTTCTTTGCCAGCTAATTTCCCTGTAAATTCAAGGCGACAACAGCCACAGTTAGCCCCCTACAAGTTAAAGTGTGATAAAGAGCCTTTAAACTCTAGGCTTGGGGTGCCAGACTTTCACCCTCAAACACCAAATTGCCCCGAGGAAACTCTGACCAAAGAATATTTACAATTTGGATATAGAGATACCGTCGAGGGACTTGAGGAAGCTAGAGAAATTTCACTGACCCAGGCTCCAAATTTTAACAAGAGAGATGTTCTTAATTGTAAAGAGGCCATTAGAAAACGTCTAAGGGCCATCAATGAATCTCGTGCTCAGAAGAGGAAGGCCGGTCAAGTATATGGGGTGGCTCTTTCAGGATCACAACTTGCTAAGCCTGGAGTTTTCCCTGAACTAAGGCAATGTGGTGAAGATTTCCGGAAGAAATGGATTGAGGGCTTATCTCAACCACACAAGCGATTACACTCTTTGGCTGATCAAGTTCCCCATGGTTATAAAAGGACATCACTATTGGAGGTTCTTATCAGGAACAATGTTCCATTGCTGAGGGCCACTTGGTTTATAAAGGTTACTTACCTTAATCAGGTTCGACCTGGTTCTGTTAGTATTTCTTCTGGGACTGCTGACAAAATACAGCTGTCCCGTTCTGAGGTTTGGACCAAAGATGTTATCAATTACTTGCAGACTCTTCTGGATGATTTTTTCTCAAAATATACTTCACATTCTACTCTTCATACTCGAGAGCGATCACCACAAATGCCTTATACTGGATCAATGCAGCACAAAAGTGATCCATTATTATCTCCTTCTGATGCTGAGGAGCCATCCTTACATTTTAGATGGTGGTATATTGTACGGCTTCTGCAATGGCATCATGCTGAAGGGCTTCTTCTTCCTTCTCTTGTCATTGATTGGGTTTTGAGTCAACTACAGGAAAAAGATCTACTTGTTGTCTGGCAACTGTTATTGCCTATAATGTATGGATTTTTAGAGATTGTTGTTCTATCCCAAACTTATGTGCGCACTCTTGCTGGAATAGCTCTTCGTGTCATTCGTGATCCTGCTCCAGGTGGATCCGATCTAGTAGATAATTCCCGTAGGGCGTATACGACTTATGCTCTGATTGAGATGCTCCGATATTTGATACTTGCAGTGCCAGATACTTTTGTTGGTTTGGATTGCTTTCCTTTACCATCCTCTGTGGTTTCACATACAATGAATGATGGGAATTTTGAACTAAAATCAACTGAAGCTGCAGTGAAGATAAAAAATAGTACAGATGATTTTGGGTACGTTGTTTCAAGCATTCATAAAAATGCAGAATATCTGGCAAAGGCTACAAGCCCAGGCTATCCAGGTCATTGTTTGGCTAAAGTTGCAAAAGCTTTGGATAAATCTCTTGTGCTGGGTGATTTACGCGGAGCATATAAATTTCTTTTTGAAGATCTTTGTGATGGAACTGTATCCGAAGCTTGGGTTGGTAAAGTCAGCCCTTGCTTAAGGTTATCACTGAAGTGGTTTGGGACTGTAAGTTCATCGCTTGTATATGCAGTGTTTTTCCTTTGTGAGTGGGCAACATGTGACTTCAGGGATTTTCGTACTACTCCTCCATGTGACATAAAGTTCACAGGTAGAAAAGATCTTTCTCAAGTGTATATAGCTGTTAGACTTTTAAAGACGAAGATGAGGGATATGAAGATTTCACCAAGACAAACCAATGGAAGAAATCCAAGAGTCGGTCACTTAGCAAAATGTTCAAATCAACAGCAGCATAATCAGAATCATGTGGGTAACGCATCCAAATTAAAGTCTAGTTCAAAATGTGTGGACCAGAGTGTATATGAAAGCCCAGGCCCTCTCCATGATATTATAGTTTGTTGGATTGATCAGCATGTTGTGCATAAAGGGGAAGGTTTCAAACGCCTGCATCTGTTTATGGTGGAACTCATTCGCGCAGGCATCTTTTACCCTGTAGCATATGTACGTCAGCTGATTGTGAGTGGGATCATGGATATGAATGTAAATGTGGTTGACTTGGAGCAGAGGAAGAGACATTATCACATCTTGAAGCAGCTTCCTGGGTGCTTTATGCATGAAGCTTTGCAAGAATCAGGGATTGTTGAAGGGCCACAGCTTGATGAAGCTTTGAAAGTTTACTTGAATGAACGCCGCCTCATACTTCGTGGTGTCCTAAGTAAGCACTGGGATGATGCCAGCATATCTTCTAAGAAGCGAAAGCAATATCCAGCTTATACAAAGGACAGGGCTTCTACAATGTCAATTGATCAGTGGAAAACTGTTTTTACCAACACAGTATCTTCTAAAAGTTCAAAGCATGTTGTTAACGTTGAGGATTTGAAAGCAGCGATTCTGTTAATACTACAGCTACCTAATAGTTTATCCAATTTGAGCACTACAGGATGTGATGAATCTGAAGGAAGTACTAGAAGACCAATCTGGTCGCATCACAGCAAGATTGATCCAGTGGAGGCTACACCTGGGAGCGACGAATCTAGAAGAGCGAAGAGACATAAATTAACTGAGGAAAGAAGCTCATTTGTTCAAGGTCATTCTGCAGTTGTACCTGATGATGACGATAGCTGGTGGGTAAAGAAGGGGCTAAAATCGTCAGAGTCTCTCAAAGTTGAACAACCACTAAAGTCAACCAAGCAAGTTACTAAGACTCGACAGAAGAATGTGCGCAAGACTCAGAGTCTTGCTCAACTTCAAGCTTCTAGAATTGAGGGTAGCCAAGGGGCATCAACTAGTCATGTGTGTGATAATAAGGTAAGCTGCCCGCACCATAGAACAGGCTTGGATGGAGATAAGCTGAAGTATGTGGATAGCCGAACAGGCCAATGTGAGGATATTGTTTCCATCGGGAAAGCAGTAAAGCGGCTTCGCTTTGTTGAGAAAAGGGCAATGGCAGTTTGGTTGATGACTGTTGTCAGGCAGGTGGTAGAAGAGAATGAAAAAAATGTTGATAAAGTTTGTCAGTTTGGCAGGCCCTTTTCTATTGTGGATGATAGCTCTACACGGTGGAAACTTGGCGAGGATGAACTTTCTTCGATACTTTATCTGATGGATATCTCTGATGATTTAGTATCAGCTGCCAAGTTCCTCATCTGGTTGCTGCCGAAGGTTTTTAATAGTCCCAATTCAACTATTCAGAGTGGAAGGAATGTTCTGATGCCGCCAAGGAATGTGGAAAACCAAGTTTGTTGTGTGGGAGAAGCTTTTCTGATATCATCACTGAGAAGGTATGAGAACATTCTTGTCGCAGCAGACCTTATTCCTGAAGCTTTGTCTTCTGCAATGTACCGTGCTGCAGCTATTGTAGCATCTAATGGAAGAGTTTCAGGTTCAGGAGCTCTGGCTTTTGCTCGGTATTTACTGAAAAAATACAGCAGTGTGTCTAGTGTTACTGAGTGGGAGAAAACTTTTAAGGCCACAAGTGATGCAAGACTTTCCTCCGAACTTGAGTGTGGACGATCAGTGGATGGTGAGTTAGGGTTTCTCCTTGGAGTTCCTGCAGGAGTTGAGGATCCTGATGATTTTTTTCGTCAAAAGATAAGTGGTGGCCGGTTACCATCCAGAGTAGGTTCAGGCATGAGAGACATAGTGCATCGCAATGTTGAAGAAGCATTACACTACCTTTTTGGAAAAGATAGAAAGCTCTTTGCTGCTGGTGGTACACCAAAGGGTCCTGGTTTAGAAAATTGGGATAATGGATATCAAATTGCTCAACAGATTGTTATGGGTTTGATCGAGTGCATAAGGCAAACTGGGGGTGCTGCTCAAGAAGGGGACCCCTCTTTGATATGTTCTGCTGTTTCTGCAATCGTTGGCAGTGTCGGTCCAACTTTAGCAAAAATGCCTGATTTTTCATCTGGCAATAATTATTCAAATACAGCGCCAACTACAAGTTCATTGAACTATGCAAGATGCATTCTGCGAATGCATATAACCTGTCTCTGCTTGCTTAAGGAAGCCCTGGGAGAACGACAGAGCCGTGTCTTTGAGATTGCTCTTGCAACGGAAGTATCTTCTGCTATTGCTGGCGTTTTTGCTCCTAGTAAAGTATCCCGATCTCAGTTTCAAATGTCTCCTGAGACCCATGATTCTAGTACCATAATTACTAATGACGTGGGAAGCAACTCTAGTAAAGTTGTGGTTGCGAGAACAACAAAAATTGCTGCTGCAGTTTCTGCACTTGTTGTTGGTGCAGTTATATATGGTGTTACCAGCCTGGAAAGGATGGTAACAGTTCTCAGATTGAAGGAGGGGCTGGATGTAGTACAATTTGCAAGAAGTACAAGATCTAATTCCAATGGAAATGCACGTTCAATTGGGGCCTTTAATAAGGTGGATACTTCAATTGAAGTTCATCTCCATTGGTTTAGATTGCTTGTTGGAAACTGCAGAACCATCTATGAAGGATTAGTGGTGGAACTCTTGGGTGAACCATCTGTTATAGCTCTTTCAAGGATGCAGTGTATGATTCCTCTTAGCTTGATCTTTCCCCCTGCCTATTCAATATTTGCCTTTGTTAAGTGGTGGCCTATCATTCTGAATCCTAATGTTGCAGTTCGTGAAGATAGGAATCATCTTTATGAGTCTCTAACTACAGCCATAACTGATGCAATTAAACATTTGCCTTTTCGAGATGTATGTTTTAGAGACAGTCAAGGACTTTATGATCTTATGGCTGCAGATCCATGTGACAGTGAATTTGCAACCTTACTAGAGGTGAATGGCTCCGATATGCATTTAAAATCCATTGCATTTGTTCCTCTCCGTTCTAGGCTTTTTCTACATGCCATGATTGATTGTAAGATACCACAAACTATTTATACAAAGGATGATGGGAACCGGCTTTCTGGACCTGGTAAATCTAAGCTTAAGGATATGCTTGTGCATGTTTTGGATACCTTGCAACCTGCAAAATTTCACTGGCAGTGGGTTGAACTAAGGTTGCTTTTAAATGAACAAGCCCTCATTGAAAAACTGGAGACACATGACATGTCCTTGGCTGAGGCTATTCAGTTGTCCTCGCCCAATGTAGAGAAGCCTACTGCTGCTTCTGAGAATGAGAACAATTTTATTCAAATACTTCTCACAAGATTACTGGTTAGACCTGATGCTGCACCCCTTTTCTCGGAGTTGGTTCATCTTATTGGTAGGTCACTAGAGGATTCAATGTTGCTGCAAGTTAAATGGTTTCTTGGTGGCCTGGATGTTCTCTTTGGTCGGAAGACCATTAGACAAAGGCTACATAACATTGCCGAGAGTAAAGAACTTTCTGTTAGGACGCAATTTTGGGAGACCTGGGGATGGTGTAACCCCTGTACTGATTCAGTAACTATTAAGGGGTCTAGAAAGAAGTTTGATACTGCATCTCTTGAAGAAGGAGAAGTTGTTGAGGAGGGAATGGATCCAAAAAGGTGCCTAAAGGGGTTCTCTCAAGTGTTGGACTCTGAAAGCTCAAGCCGTAACCAGCTTCAAGTTACTGAGAGGGCTCTTATTGAGTTACTTCTTCCTTGCATAGATCAAAGCTCTGATGAGTCTCGCAATTCCTTCGCAAATGATTTAATCAAACAGTTAAATTTTATTGAGCAACAAATAACTGCTGTTACACGTGGGGCAAATAAGCCAGTGGGAAGTACTCCATCTGGAGTTGAAGGTCAGACAAATAAAGTAAGTACCCGCAAGATTATAAAAGGTGGCGGCCCTGGATTAGCTAGACGAGCAACAGTTTCAACAGACTCTTCACCACCTTCTCCTGAAGCCCTGCGAGCTTCTGTGTCATTACGTTTGCAGTTACTCTTGAGATTCCTTCCTATTCTTTGCACTGACAGGGAGCCATCTGTGCGGAACATGAGACATACACTTTCCTCTGTAATTTTACGTCTCCTTGGTAGCCGGGTTGTGCATGGGGATGCAGACATTTCCATGCACTGTTCTCTGATGAGGAAGGAGGTGGAGTCATCTTCTGAAGCTGCTTCTGCTGCATTTGTAGATTCTTCTGATGAGGGTCTGTTTGATCGGCTGTTGTTGGTTTTGCATGGATTGTTAAGTAGTTGTTCTCCAAGTTGGCTAAGACAGAAACCCTTTTCAAAGATGACCAATGGACATGTGAGGGAATTTTCTGGATTTGATCGAGAGGTTTTGGAGACTATGCAGAATGAGTTGGAATCTATGCAACTGCCAGACACTATTAGGTGGCGTATCCAAGCTGCAATGCCCATACTCCTTCCCTCTATGCAGTGCTCTTTCTCATGCCAGCCGCCACATGTTCCAGTTTCTGCTGTTTCTTGTCTTCAACCCATCACTGCATATCCTGGGTTTAACTCCAGTAGTTCGACTGCCCCTCAGAGGAACCCGGTTCCATTATCAAGGATTGCAGCTAATGCATCAGGGAAAGCAAAAAAACAGGACAATGACTTTGAAGTTGATCCTTGGATGCTTTTAGAAGACAGCGCCGGGTCTTGCCCGTCTGGTAGTAATGCTGCTAGCATAGCAAGTGGTGATAATGTTAATATTCGAGCCGCCAGTTGGCTAAAAGGAGCCGTAAGGTTTAGGCGGACAGACTTGACATATGTCGGCGCTGTTGATGACAATAGTTGA 6720 0.4274 MQRYHAGSCTSAVNNSAIGGPSSRDTGRPDSSSLPANFPVNSRRQQPQLAPYKLKCDKEPLNSRLGVPDFHPQTPNCPEETLTKEYLQFGYRDTVEGLEEAREISLTQAPNFNKRDVLNCKEAIRKRLRAINESRAQKRKAGQVYGVALSGSQLAKPGVFPELRQCGEDFRKKWIEGLSQPHKRLHSLADQVPHGYKRTSLLEVLIRNNVPLLRATWFIKVTYLNQVRPGSVSISSGTADKIQLSRSEVWTKDVINYLQTLLDDFFSKYTSHSTLHTRERSPQMPYTGSMQHKSDPLLSPSDAEEPSLHFRWWYIVRLLQWHHAEGLLLPSLVIDWVLSQLQEKDLLVVWQLLLPIMYGFLEIVVLSQTYVRTLAGIALRVIRDPAPGGSDLVDNSRRAYTTYALIEMLRYLILAVPDTFVGLDCFPLPSSVVSHTMNDGNFELKSTEAAVKIKNSTDDFGYVVSSIHKNAEYLAKATSPGYPGHCLAKVAKALDKSLVLGDLRGAYKFLFEDLCDGTVSEAWVGKVSPCLRLSLKWFGTVSSSLVYAVFFLCEWATCDFRDFRTTPPCDIKFTGRKDLSQVYIAVRLLKTKMRDMKISPRQTNGRNPRVGHLAKCSNQQQHNQNHVGNASKLKSSSKCVDQSVYESPGPLHDIIVCWIDQHVVHKGEGFKRLHLFMVELIRAGIFYPVAYVRQLIVSGIMDMNVNVVDLEQRKRHYHILKQLPGCFMHEALQESGIVEGPQLDEALKVYLNERRLILRGVLSKHWDDASISSKKRKQYPAYTKDRASTMSIDQWKTVFTNTVSSKSSKHVVNVEDLKAAILLILQLPNSLSNLSTTGCDESEGSTRRPIWSHHSKIDPVEATPGSDESRRAKRHKLTEERSSFVQGHSAVVPDDDDSWWVKKGLKSSESLKVEQPLKSTKQVTKTRQKNVRKTQSLAQLQASRIEGSQGASTSHVCDNKVSCPHHRTGLDGDKLKYVDSRTGQCEDIVSIGKAVKRLRFVEKRAMAVWLMTVVRQVVEENEKNVDKVCQFGRPFSIVDDSSTRWKLGEDELSSILYLMDISDDLVSAAKFLIWLLPKVFNSPNSTIQSGRNVLMPPRNVENQVCCVGEAFLISSLRRYENILVAADLIPEALSSAMYRAAAIVASNGRVSGSGALAFARYLLKKYSSVSSVTEWEKTFKATSDARLSSELECGRSVDGELGFLLGVPAGVEDPDDFFRQKISGGRLPSRVGSGMRDIVHRNVEEALHYLFGKDRKLFAAGGTPKGPGLENWDNGYQIAQQIVMGLIECIRQTGGAAQEGDPSLICSAVSAIVGSVGPTLAKMPDFSSGNNYSNTAPTTSSLNYARCILRMHITCLCLLKEALGERQSRVFEIALATEVSSAIAGVFAPSKVSRSQFQMSPETHDSSTIITNDVGSNSSKVVVARTTKIAAAVSALVVGAVIYGVTSLERMVTVLRLKEGLDVVQFARSTRSNSNGNARSIGAFNKVDTSIEVHLHWFRLLVGNCRTIYEGLVVELLGEPSVIALSRMQCMIPLSLIFPPAYSIFAFVKWWPIILNPNVAVREDRNHLYESLTTAITDAIKHLPFRDVCFRDSQGLYDLMAADPCDSEFATLLEVNGSDMHLKSIAFVPLRSRLFLHAMIDCKIPQTIYTKDDGNRLSGPGKSKLKDMLVHVLDTLQPAKFHWQWVELRLLLNEQALIEKLETHDMSLAEAIQLSSPNVEKPTAASENENNFIQILLTRLLVRPDAAPLFSELVHLIGRSLEDSMLLQVKWFLGGLDVLFGRKTIRQRLHNIAESKELSVRTQFWETWGWCNPCTDSVTIKGSRKKFDTASLEEGEVVEEGMDPKRCLKGFSQVLDSESSSRNQLQVTERALIELLLPCIDQSSDESRNSFANDLIKQLNFIEQQITAVTRGANKPVGSTPSGVEGQTNKVSTRKIIKGGGPGLARRATVSTDSSPPSPEALRASVSLRLQLLLRFLPILCTDREPSVRNMRHTLSSVILRLLGSRVVHGDADISMHCSLMRKEVESSSEAASAAFVDSSDEGLFDRLLLVLHGLLSSCSPSWLRQKPFSKMTNGHVREFSGFDREVLETMQNELESMQLPDTIRWRIQAAMPILLPSMQCSFSCQPPHVPVSAVSCLQPITAYPGFNSSSSTAPQRNPVPLSRIAANASGKAKKQDNDFEVDPWMLLEDSAGSCPSGSNAASIASGDNVNIRAASWLKGAVRFRRTDLTYVGAVDDNS 2239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0839 2239 MobiDBLite consensus disorder prediction 1938 1960 - -
Lal22g0839 2239 Pfam Transcription mediator complex subunit Med12 160 220 IPR019035 GO:0003712|GO:0006357|GO:0016592
Lal22g0839 2239 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1 2239 - -
Lal22g0839 2239 MobiDBLite consensus disorder prediction 835 887 - -
Lal22g0839 2239 MobiDBLite consensus disorder prediction 276 296 - -
Lal22g0839 2239 MobiDBLite consensus disorder prediction 276 299 - -
Lal22g0839 2239 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 2239 - -
Lal22g0839 2239 MobiDBLite consensus disorder prediction 1 48 - -
Lal22g0839 2239 MobiDBLite consensus disorder prediction 846 882 - -
Lal22g0839 2239 SMART Med12_2 159 220 IPR019035 GO:0003712|GO:0006357|GO:0016592
Lal22g0839 2239 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0839 Lal-Chr22 6285894 6299683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0839 - - gmx:100781696 3382.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0839 22 6285894 6299683 Lal22g0839 22 6285894 6299683 ECH
Lal6g0961 6 6680229 6693193 Lal22g0839 22 6285894 6299683 LSH
Lal22g0839 22 6285894 6299683 Lal18g0736 18 8607618 8622962 LSH