Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0941 ATGTCTATGTCTTCTTCTTCATTTTCATTTTCTAATGAAACAATTTGGGGCAAAAGGGTATCTCAAAAGGTTCTTACTTTGTACAATTCTCTTCCTAAGAAAGGAAAACCTCAACGACATGAATTCACTGTTTTGTCTGCTTTCATTCTCTCTTCTCCTTCCAATGAATTGGAGGTTGTTGCATTGGGTACTGGAAGAAAGTGTATTTCACGTTCTCTATTGCGTCCTTGTGGTGACATTGTTCATGATTCTCATGCTGAAGTTGTAGCTCGAAGAGCTCTCATCAGGTTCTTCTATACACATATCCAGCATCTTACTGGAACTTGTAGCACGAATACAGCTAGCAATGGAAGCAAACGGTTCAAAATTAACGATGACAACATGCCATTCGAGTTGGACTCTGAGTGTCTTGATAAAAGAAAATATACCATGAAAAGGGGTTGGAAATTACATATGTACATATCGCAATTACCATGTGGAGATGCTTCATTGAGTTCGATTGTCTCTCCAGTGGAAGCTGTGCATAACGATTCCATTGGTAATAGTTCGAAACAGAAGGGAATGATCGAGAGGAAGCCAGGTCGTGGTGATCCAACCTTGTCAGTTAGTTGCTCTGACAAGATAGCTCGTTGGAACGTTGTTGGTGTTCAAGGAGCTTTGCTTTCCTACTTTCTTCAGCCTGTGTATCTTTCTTCAGTTACGGTTGGTCTGCCCTCTAACATTCCGGATCGTTTCCAGTTTGAGGACACCTTGAAAAGAGCTTTGTGCAAATATATTCTACCCTTTTCATATGAGCTAACTACTCCGTATCGAGTGAATCAGCCGCTATTTCATGCTGCCCCAGTACCACCAAAGGATTTTCAGCAATCTGAGAGAGCTGCTAACACTTTAACATGCGGATATTCTATATGTTGGAATAAATGTGGCTTGCACGAAGTCATCATTGGAACTACCGGAAGAAAGCAAGGCACGACCTCTTCAAGAGGAGCATTGTACCCGTCATCGGAGTTGTCTTTATGCAAAAAAAGACTATTAGAGGTTTTCTTGTCACTGAGGCTGGAGTGCTTGACAAGTTCTTTGGCCAATATGTTCACATATCGTGAACTTAAGGATGGGGCTAAAGAATATCATTTGGCTTCCAAAATATTTAAGGGGGAGGCACCATTTAGTGATTGGTTCTTAAAACCTTTGGGTTATGAGGCATTCCCCATCCCAAACTAG 1221 0.4128 MSMSSSSFSFSNETIWGKRVSQKVLTLYNSLPKKGKPQRHEFTVLSAFILSSPSNELEVVALGTGRKCISRSLLRPCGDIVHDSHAEVVARRALIRFFYTHIQHLTGTCSTNTASNGSKRFKINDDNMPFELDSECLDKRKYTMKRGWKLHMYISQLPCGDASLSSIVSPVEAVHNDSIGNSSKQKGMIERKPGRGDPTLSVSCSDKIARWNVVGVQGALLSYFLQPVYLSSVTVGLPSNIPDRFQFEDTLKRALCKYILPFSYELTTPYRVNQPLFHAAPVPPKDFQQSERAANTLTCGYSICWNKCGLHEVIIGTTGRKQGTTSSRGALYPSSELSLCKKRLLEVFLSLRLECLTSSLANMFTYRELKDGAKEYHLASKIFKGEAPFSDWFLKPLGYEAFPIPN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0941 406 Pfam Adenosine-deaminase (editase) domain 61 396 IPR002466 GO:0003723|GO:0004000|GO:0006396
Lal6g0941 406 PANTHER A-TO-I RNA EDITING REGULATOR ADR-1 12 404 - -
Lal6g0941 406 ProSiteProfiles Adenosine to inosine editase domain profile. 61 402 IPR002466 GO:0003723|GO:0004000|GO:0006396
Lal6g0941 406 SMART adara_8 15 403 IPR002466 GO:0003723|GO:0004000|GO:0006396
Lal6g0941 406 PANTHER EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN 12 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0941 Lal-Chr6 6555924 6559301 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0941 K15440 - gmx:100789591 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0941 6 6555924 6559301 Lal6g0941 6 6555924 6559301 ECH
Lal6g0941 6 6555924 6559301 Lal18g0770 18 9450764 9454045 LSH