Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0770 ATGTCTATGTCTTGTTCATTATCTTCTGAGGAAACAATAAGTTGGGGAGAAAGGGTATCCCAAAAGGTTCTTGCTTTGTACAATTCTCTCCCCAAGAAAGGAAAACCGCAAGGCCGTGAAGTTACTGTTTTTTCTGCTTTTCTTCTTTCTTCTCCTTCCAATGATTTGGAGGTTGTTGCATTGGGAACGGGAACAAAGTGTATTGGACGTTCTCTGTTGCGGCCTTGTGGTGATGTTGTTCATGATTCTCATGCTGAAGTTGTAGCTCGAAGAGCTTTAATCAGGTTCTTATATACACAGATTCAACATCTGAATGAAACTTGTAGTAAGCATATACCTAGCAATGGAAGCAAACGATTCAAGGTTGATGACGACGACTTACCTTTCGAGTTGGACTCGGGGTGTCTTGATAAACAAAAATATACCATGAAAAGGGGTGGAGATGCTTCACTGAGTTCACTTGTCTCTCCTCTGGAAAGTGCACCTTTACAAGAAAGTGATTCCCCTTCACCTTCGTGCGAGTTAAATAAGTCCATTGATAATATTTCAAATTTCTATCAAATGGGGGTGGTCCAGAGGAAGCCGGGTCGTGGTGATACAACTTTGTCAGTTAGTTGCTCTGACAAGATAGCTCGTTGGAATGTTGTTGGTGTTCAAGGAGCTTTGCTTTCCTACTTTCTTCAGCCTTTATATATATCTTCAATTACTGTTGGTCTGCCCCTTAAGATTCCAGATCCACATAATTTTCGTATTGAGGATAACTTGAAGAGAGCTTTGTATGATCGTATCTTACCCTTCTCAAATGACCTTACGACTCCGTATCGAGTGAATCAGCCGCTATTTCATGCTTCCCCGGTACCACCGAAGGACTTTCAGCAATGTGAGAGTGCTGCTAACACTTTAACATGCGGATATTCTATATGTTGGAATAAATGTGGCTTGCATGAAGTCATCCTTGGAACTACTGGAAGAAAGCAAGGCACCTCTGCAAAAGGAGCAACGTTCCCGTCATCCGAGTCATCTTTATGCAAAAAGAGGTTGTTAGAAGTTTTCTTGTCATTGAGGCTGGAGTGCTTGACCAGTTCTACGACCGATATGATTACATATCGGGAACTTAAGGATGGGTCTAAAGAATATCATTTAGCTTCCAAAATTTTTAAAGGGAAGCCACCTTTTAACAAATGGTTCTTGAAACCCTTGGAATATGAGGCATTCCCCACCCTAAAATAG 1230 0.4138 MSMSCSLSSEETISWGERVSQKVLALYNSLPKKGKPQGREVTVFSAFLLSSPSNDLEVVALGTGTKCIGRSLLRPCGDVVHDSHAEVVARRALIRFLYTQIQHLNETCSKHIPSNGSKRFKVDDDDLPFELDSGCLDKQKYTMKRGGDASLSSLVSPLESAPLQESDSPSPSCELNKSIDNISNFYQMGVVQRKPGRGDTTLSVSCSDKIARWNVVGVQGALLSYFLQPLYISSITVGLPLKIPDPHNFRIEDNLKRALYDRILPFSNDLTTPYRVNQPLFHASPVPPKDFQQCESAANTLTCGYSICWNKCGLHEVILGTTGRKQGTSAKGATFPSSESSLCKKRLLEVFLSLRLECLTSSTTDMITYRELKDGSKEYHLASKIFKGKPPFNKWFLKPLEYEAFPTLK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0770 409 Pfam Adenosine-deaminase (editase) domain 60 399 IPR002466 GO:0003723|GO:0004000|GO:0006396
Lal18g0770 409 PANTHER A-TO-I RNA EDITING REGULATOR ADR-1 10 406 - -
Lal18g0770 409 PANTHER EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN 10 406 - -
Lal18g0770 409 ProSiteProfiles Adenosine to inosine editase domain profile. 60 405 IPR002466 GO:0003723|GO:0004000|GO:0006396
Lal18g0770 409 SMART adara_8 14 406 IPR002466 GO:0003723|GO:0004000|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0770 Lal-Chr18 9450764 9454045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0770 K15440 - gmx:100789591 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0941 6 6555924 6559301 Lal18g0770 18 9450764 9454045 LSH