Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0937 ATGGCAGAATCAGTGAAAAGATATGCTGTTGTTACAGGGGGAAATAGGGGCATAGGGTTCTCCATATGCAAGTTGCTAGCCTCTAATGGAGTCACAGTGGTGCTAACAGCTAGAGACCACAAAAGGGGTCTTGAAGCTGTTGAAAAATTGAATGAACTTGGTCTCAAAGGCCATGTGGTTTTTCATTACCTTGATGTAACAGATCGTGCTACTATTCCACCCCTTTTTAATTTCATCGTAGCACAATTTGGAAAACTTGATATATTGGTCAATAATGCAGGGATTAGTGCAGTAGTATCAGATGTTGCTGCTTTAGCAGCTTCAGATATTGAGGAAAAAGGTCCCCATGGTTTTGATTGGAGTAAAATACTAAATTTAGATGAAAAATTAGTTGAACCAGCTATTAAAACAAACTACTATGGACCCAAACATGTATCTGAAGCACTTGTCCCCCTTCTTCAGCTCTCAGATTCTCCAAGAATTGTTAATGTTTCTGCCACCATGGGAGGCCTAGAGTTTATACAAGATGCATGGACTAAAGAAGTACTCAGTGATATTGAAAACCTTACACCAAAAAAGATCAAGGTCGTTGTGGATCAGTTTCTTTTAGAATATCAAAAGGGTTTATTGGAAACCAAAGGCTGGTCTTCTCAATTATCTGTCTATACTATCTCAAAAGCAGCATTGAATGCTTACACAAGACTTTTTGCAAAAAAGTATCCATCTTTCTGTGTTAATGCTGTTTGCCCTGGCCATGTAAAATCAGATTTTAGCCACAATACTGGGAATTTCACTACAGATGAAGGTGCTGAATGTGTTGTGAGGCTTGCTTTGTTACCTAATGGTAGTTCTTCTGGTCTCTTCTTCAATAGAAATGAAGTTAGGCCATTTTGA 894 0.3848 MAESVKRYAVVTGGNRGIGFSICKLLASNGVTVVLTARDHKRGLEAVEKLNELGLKGHVVFHYLDVTDRATIPPLFNFIVAQFGKLDILVNNAGISAVVSDVAALAASDIEEKGPHGFDWSKILNLDEKLVEPAIKTNYYGPKHVSEALVPLLQLSDSPRIVNVSATMGGLEFIQDAWTKEVLSDIENLTPKKIKVVVDQFLLEYQKGLLETKGWSSQLSVYTISKAALNAYTRLFAKKYPSFCVNAVCPGHVKSDFSHNTGNFTTDEGAECVVRLALLPNGSSSGLFFNRNEVRPF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0937 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Lal6g0937 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 IPR002347 -
Lal6g0937 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 222 241 IPR002347 -
Lal6g0937 297 Gene3D - 3 297 - -
Lal6g0937 297 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Lal6g0937 297 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Lal6g0937 297 PRINTS Glucose/ribitol dehydrogenase family signature 153 169 IPR002347 -
Lal6g0937 297 PRINTS Glucose/ribitol dehydrogenase family signature 222 241 IPR002347 -
Lal6g0937 297 PRINTS Glucose/ribitol dehydrogenase family signature 241 258 IPR002347 -
Lal6g0937 297 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 1 297 - -
Lal6g0937 297 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 297 - -
Lal6g0937 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 284 IPR036291 -
Lal6g0937 297 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 209 237 IPR020904 GO:0016491
Lal6g0937 297 Pfam short chain dehydrogenase 8 172 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0937 Lal-Chr6 6526866 6529129 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0937 9 250 Miscellaneous Gene Families AT2G29150 27.236 7.68e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0937 K15095 - gmx:100803877 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0937 6 6526866 6529129 Lal6g0937 6 6526866 6529129 ECH
Lal6g0937 6 6526866 6529129 Lal6g0937 6 6526866 6529129 PCT
Lal22g0819 22 6124276 6127099 Lal6g0937 6 6526866 6529129 PCT