Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0920 ATGTATTTTGCTCCAAGGGATTCACACAAATCACAGATACAATTTGCTCTGGAAAGAGGAATACCAGCTTTTAGTGCCATGCTTGGTACTCGTAGACTCCCATTTCCTGCATTTGGGTTTGACTTAGTTCATTGTTCTCGCTGTTTGATCCCTTTCACTGCCTACAATGCAACTTATTTCATTGAAGTGGATAGATTACTTCTCCCTGGTGGATATTTAGTCATTTATGGTCCCCCTGTTCAATGGCCCAAACAAGACAAAGAATGGTCTGATCTCCAGGGTGTGGCAAGAGCTTTGTGTTATGAACTCATTGCTGTAGATGGTAACACTGTGATCTGGAAAAAACCAGTAGAGGATACATGTCTCCCAAATAACAATGAATTTGGTCTTGAGTCATGCGTTGATTTAGATGACCCAAGTTCTGCTTGGTACTTCAAATTGAAGAAATGTGTCAGTAGGAGATCTTCTATCAAAGGAGAATATGGAATTGGGACGATTCCTGAGTGGCCAGGGAGGCTAACTGCTCCATCTCCGAGGTCCACACACCTAAGAAATGGTGCTGATGTGTATGAGGCTGACACTAAGCGGTGGGTAAGGAAGGTTGCACACTATAAGAATTCTCTAAATGTAAAGTTGGGGACTCCAGCTATACGCAATGTCATGGACATGAATGCTTTCTTTGGGGGTTTTGCAGCAGCACTAATTTCTGATCCTGTGTGGGATAATGTTTTGGATCTAAGTTGCTTGGTTACTGTTCTCAGGTGTGAACCTTTCTCAACATATCCCCGTACTTATGACTTGATCCATGTGTCCAGCATAGAATCACTTCTAAAAGATCAAGCTTCTGGCCAAAACAGATGTAACCTTGTTGATTTGATGGTAGAAATGGATCGAATTTTGCGGCCAGAAGGAACGGTTGTGTTGAGGGATACCCCGGAAGTAATTGAGAGAGTGGCTCGTGTTGCTGGTGCATTGAGGTGGCGACCTACCATATATGATAAAGATCCCGAATCACATGGCAGAGAGAAAATTCTAGTTTCAACTAAGACCTTCTGGAAGCTCTAA 1065 0.4282 MYFAPRDSHKSQIQFALERGIPAFSAMLGTRRLPFPAFGFDLVHCSRCLIPFTAYNATYFIEVDRLLLPGGYLVIYGPPVQWPKQDKEWSDLQGVARALCYELIAVDGNTVIWKKPVEDTCLPNNNEFGLESCVDLDDPSSAWYFKLKKCVSRRSSIKGEYGIGTIPEWPGRLTAPSPRSTHLRNGADVYEADTKRWVRKVAHYKNSLNVKLGTPAIRNVMDMNAFFGGFAAALISDPVWDNVLDLSCLVTVLRCEPFSTYPRTYDLIHVSSIESLLKDQASGQNRCNLVDLMVEMDRILRPEGTVVLRDTPEVIERVARVAGALRWRPTIYDKDPESHGREKILVSTKTFWKL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0920 354 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 353 IPR004159 GO:0008168
Lal6g0920 354 PANTHER PMT16, PUTATIVE-RELATED 1 353 - -
Lal6g0920 354 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 1 349 IPR004159 GO:0008168
Lal6g0920 354 Gene3D Vaccinia Virus protein VP39 7 107 IPR029063 -
Lal6g0920 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 7 93 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0920 Lal-Chr6 6382477 6390859 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0920 K23872 - gmx:100812418 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0920 6 6382477 6390859 Lal6g0920 6 6382477 6390859 ECH
Lal6g0920 6 6382477 6390859 Lal18g0801 18 10196162 10201281 LSH
Lal6g0920 6 6382477 6390859 Lal6g0920 6 6382477 6390859 PCT
Lal6g0920 6 6382477 6390859 Lal18g0801 18 10196162 10201281 PCT
Lal18g0801 18 10196162 10201281 Lal6g0920 6 6382477 6390859 PCT