Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0801 ATGGGTCACGTGAACCTTCCACCTTCGAAGCGTAACCCTCGTCAATGGCGAATCCTAGACCTTGTCTCCGCCGCTTTCTTCGCCCTCGTCTTCATCTTCTTCCTCATGGTCTTCACTCCTCTCGGCGACTCCCTCGCTGCCTCCGGACGCCAGACTCTCCTCATGTCCGCCTCCGATCCCAAGCAACGCCATCGCCTTGTCGCGGCTATCGAGCTTGGCCTGCAGCGGAGCATTGAGGTGTGCACTGCTGATGCGGTGGACCACATGCCGTGCGAGGATCCGAGGCGGAATAGTCAGTTGAGTAGAGAGATGAATTATTATAGAGAGAGACATTGTCCTCCGCCGGAGGATACGCCGCTTTGTCTGATTCCGCCGCCGAGTGGTTACAAGGTTTCGGTTCAGTGGCCTGAGAGCTTATACAAGATATGGCACAGCAACATGCCACACAACAAGATTGCTGATAGGAAAGGTCATCAAGGATGGATGAAACTCGAAGGTCCACACTTTATATTCCCTGGAGGTGGAACTATGTTTCCAGATGGAGCAGTGCAGTATATTGAAAAACTTGGTCAATACATTCCAATAAATACTGGTGTTCTGAGGACTGCTCTTGATATGGGGTGTGGGGTTGCCAGTTTTGGAGGATTTTTACTGGCTCAAAACATTTTGACGATGTCTTTTGCTCCACGAGATTCACACAAATCACAGATACAATTTGCTCTGGAAAGAGGAATACCAGCTTTTAGTGCCATGCTTGGTACTCGCAGACTCCCATTTCCGGCATTTGGATTTGACTTAGTTCATTGTTCTCGCTGTTTGATCCCTTTCACAGCCTACAATGCAACCTATTTCATTGAAGTGGATAGGTTACTTCGCCCTGGTGGATATTTAGTCATCTCTGGTCCCCCAGTTCAGTGGCCCAAACAAGACAAAGAATGGTCTGATCTCCAGGGTGTGGCAAGAGCTTTGTGCTATGAACTCATTGCTGTAGATGGTAACACTGTTATCTGGAAAAAGCCAATAGAGGATACATGTCTCCCAAATAACAATGAATTTGGTCTTGAGTCATGTGTTGATTCAGATGACCCAAGTTCTGCTTGGTATTTCAAATTGAAGAAATGTGTCAGTAGGAGATCTTCTATAAAAGGAGAATATGGAATTGGGACAATTCCCAAGTGGCCAGAGAGGCTAACTGCTCCATCTCCTAGGTCCACACACTTAAAAAATGGTGCTGATGTATATGAGGCTGACACTAAGCGGTGGGTAAGGAGGGTTTCATACTATAAGAATTCTCTAAATGTAAAGTTGGGGACTCCAGCTATACGCAACGTCATGGACATGAATGCATTCTTTGGGGGTTTTGCAGCAGCGCTAATTTCTGATTCTGTGTGGGTAATGAATGTAGTTCCATCTCGCAAGCCATCCACTCTTGATGTGATCTTTGACAGAGGCCTTATTGGAGTTTATCATGATTGGTGTGAACCTTTCTCAACATATCCCCGTACTTATGATTTTATCCACGTGTCCAGCATTGAATCACTTCTAAAAGATCAAGCTTCTGGCAAAAACAGATGTAACCTTGTCGATTTGATGGTGGAAATGGATCGAATTTTGCGGCCAGAAGGAACAGTTGTGATTAGGGATACCCCTGAAGTAATTGAGAGAGTAGCTCGTGTTGCTACTGCAATGAGGTGGAGACCCACCATACATGATAAAGAGCCTGAATCACATAGCAGAGAGAAAATTCTAGTTGCAACCAAGACCTTCTGGAAGCTTTAA 1779 0.4592 MGHVNLPPSKRNPRQWRILDLVSAAFFALVFIFFLMVFTPLGDSLAASGRQTLLMSASDPKQRHRLVAAIELGLQRSIEVCTADAVDHMPCEDPRRNSQLSREMNYYRERHCPPPEDTPLCLIPPPSGYKVSVQWPESLYKIWHSNMPHNKIADRKGHQGWMKLEGPHFIFPGGGTMFPDGAVQYIEKLGQYIPINTGVLRTALDMGCGVASFGGFLLAQNILTMSFAPRDSHKSQIQFALERGIPAFSAMLGTRRLPFPAFGFDLVHCSRCLIPFTAYNATYFIEVDRLLRPGGYLVISGPPVQWPKQDKEWSDLQGVARALCYELIAVDGNTVIWKKPIEDTCLPNNNEFGLESCVDSDDPSSAWYFKLKKCVSRRSSIKGEYGIGTIPKWPERLTAPSPRSTHLKNGADVYEADTKRWVRRVSYYKNSLNVKLGTPAIRNVMDMNAFFGGFAAALISDSVWVMNVVPSRKPSTLDVIFDRGLIGVYHDWCEPFSTYPRTYDFIHVSSIESLLKDQASGKNRCNLVDLMVEMDRILRPEGTVVIRDTPEVIERVARVATAMRWRPTIHDKEPESHSREKILVATKTFWKL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0801 592 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 14 591 IPR004159 GO:0008168
Lal18g0801 592 Gene3D Vaccinia Virus protein VP39 177 330 IPR029063 -
Lal18g0801 592 PANTHER PMT16, PUTATIVE-RELATED 14 591 - -
Lal18g0801 592 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 87 587 IPR004159 GO:0008168
Lal18g0801 592 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 435 566 IPR029063 -
Lal18g0801 592 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 313 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0801 Lal-Chr18 10196162 10201281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0801 K23872 - gmx:100812418 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0801 18 10196162 10201281 Lal18g0801 18 10196162 10201281 ECH
Lal6g0920 6 6382477 6390859 Lal18g0801 18 10196162 10201281 LSH
Lal6g0920 6 6382477 6390859 Lal18g0801 18 10196162 10201281 PCT
Lal18g0801 18 10196162 10201281 Lal6g0920 6 6382477 6390859 PCT