Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0663 ATGGTTGAATTGAACCGTTACTATCGTTCACCACAAACACTGTGTTGTTCAACACAACAACCCAATCATAGTAATAATAATCACATTCTCTCTAACACTAACCCTCCTCCTCCATTAATTACCATGCCCACCGGCGAACTCCGCCACTCATCGCCGCCAATCACGGCCAACAACTCCTCCTCCACCGCCGCCGCCTACGATGACGATGCATGGGTGTGGGCCCAGATTAAAGCGGAGGCGCGTCGAGATGCTGAATCTGAACCCGCTCTAGCTAGCTACTTATATTCGACGATTCTATCGCATTCTTCGCTTGAACGATCGATATCGTTTCACCTTGGCAACAAGCTTTGTTCATCAACGCTTCTTTCAACTCTCCTTTATGATCTTTTCCTTAATGCTTTCACTTCTGATCCTTCTCTTCGATCTGCTGCTATCGCTGATTTACGCGCCGCTCGAGAACGTGACCCTGCTTGTATATCATTCTCACACTGTCTCCTTAATTATAAGGGCTTCCTCGCATGCCAGGCGCAACGTGTGGCTCACCGGCTGTGGCAGCAGTCGCGGCAGCCATTGGCACTGGCACTGCACTCTCGCATAGCAGATGTTTTTGCAGTGGATATTCACCCCGCAGCCAGGATTGGGAAGGGTGTTCTGTTTGATCATGCTACAGGCGTGGTGGTTGGGGAGACGGCAGTGATTGGGAACAATGTCTCAATTCTGCATCATGTGACGCTGGGTGGGACTGGGAAGGTTGGTGGGGATCGGCATCCTAAGATTGAGGATGGGGTGCTTATTGGTGCTGGAGCTACCATTCTGGGGAATGTGAAGATTGGGGAAGGTGCAAAGATTGGTGCTGGGAGTGTTGTTTTGATTGATGTGCCACCACGGACCACTGCAGTTGGGAACCCGGCAAGGTTGGTGGGTGGGAAGGAAAAACCATCTAAGCACGAGGATGTCCCTGGGGAATCCATGGACCATACTTCCTTCATGTCTGAGTGGTCAGATTATATCATTTGA 1017 0.5044 MVELNRYYRSPQTLCCSTQQPNHSNNNHILSNTNPPPPLITMPTGELRHSSPPITANNSSSTAAAYDDDAWVWAQIKAEARRDAESEPALASYLYSTILSHSSLERSISFHLGNKLCSSTLLSTLLYDLFLNAFTSDPSLRSAAIADLRAARERDPACISFSHCLLNYKGFLACQAQRVAHRLWQQSRQPLALALHSRIADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIEDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFMSEWSDYII 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0663 338 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 265 293 IPR018357 GO:0016740
Lal6g0663 338 Pfam Serine acetyltransferase, N-terminal 72 176 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lal6g0663 338 SUPERFAMILY Trimeric LpxA-like enzymes 67 308 IPR011004 -
Lal6g0663 338 PANTHER SERINE ACETYLTRANSFERASE 58 338 - -
Lal6g0663 338 MobiDBLite consensus disorder prediction 301 326 - -
Lal6g0663 338 Pfam Hexapeptide repeat of succinyl-transferase 223 239 IPR001451 -
Lal6g0663 338 Gene3D serine acetyltransferase, domain 1 54 205 IPR042122 -
Lal6g0663 338 SMART SATase_N_2_a 72 176 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lal6g0663 338 Pfam Bacterial transferase hexapeptide (six repeats) 256 289 IPR001451 -
Lal6g0663 338 TIGRFAM cysE: serine O-acetyltransferase 146 305 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lal6g0663 338 CDD LbH_SAT 203 303 IPR045304 -
Lal6g0663 338 Gene3D Hexapeptide repeat proteins 206 327 - -
Lal6g0663 338 MobiDBLite consensus disorder prediction 309 323 - -
Lal6g0663 338 PANTHER BNAC03G13300D PROTEIN 58 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0663 Lal-Chr6 4370868 4378716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0663 72 307 Miscellaneous Gene Families AT2G17640 56.780 4.89e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0663 K00640 - gmx:547632 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0663 6 4370868 4378716 Lal22g0598 22 4216953 4221021 LSH