Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0598 ATGCCTACCAGCGAAGTCCGCTACGTCTCGCCGCCCATAACGGCCAACTCCTCCACCGTCATCTTCGGCGCCAACGAAGATGACACGTGGGTATGGGCCCAGATCAAATCGGAGGCTCGCCGCGACGCTGAATCCGAACCCGCTTTAGCGAGCTACCTTTATTCAACGATTCTATCGCACTCGTCGCTAGAACAATCGCTATCGTTTCACCTTGGCAATAAGCTTTGTTCATCAACGCTTTTATCCACTCTCCTTTATGATCTTTTCCTCAACGCTTTTACCTCTGATCCTTCTCTCCGTTCCGCCGCCATCGCTGACTTACGCGCCGCCCGTCAACGTGATCCCGCTTGTCAATCCTTCTCTCACTGTTTCCTTAACTATAAGGGCTTCCTCGCTTGCCAGGCTCACCGTGTGACACACCGGCTTTGGCAGCAGTCGCGGCAGCCATTAGCACTGGCACTGCACTCCCGTATTGCTGATGTTTTTGCAGTGGATATTCACCCGGCAGCCAGGATAGGGAAGGGTGTTCTGTTTGATCATGCAACGGGCGTCGTGGTGGGGGAGACAGCGGTGATTGGGAACAATGTATCAATTCTGCACCATGTGACGCTGGGTGGGACAGGTAAGGTTGGTGGAGATCGACATCCTAAGATTGAGGATGGGGTGCTTATTGGTGCTGGTGCTACCATTCTGGGAAATGTGAAGATTGGGGAAGGTGCAAAGATTGGTGCTGGGAGTGTTGTTTTGATCGATGTGCCACCGCGGACAACTGCAGTTGGCAACCCGGCGAGGTTGGTGGGTGGGAGGGAAAAGCCATCTAAGAACAAGGATGTGCCTGGGGAGTCCATGGACCATACTTCCTTCATGTCTGAGTGGTCTGATTATATCATATGA 894 0.5302 MPTSEVRYVSPPITANSSTVIFGANEDDTWVWAQIKSEARRDAESEPALASYLYSTILSHSSLEQSLSFHLGNKLCSSTLLSTLLYDLFLNAFTSDPSLRSAAIADLRAARQRDPACQSFSHCFLNYKGFLACQAHRVTHRLWQQSRQPLALALHSRIADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIEDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGREKPSKNKDVPGESMDHTSFMSEWSDYII 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0598 297 Pfam Serine acetyltransferase, N-terminal 31 135 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lal22g0598 297 PANTHER SERINE ACETYLTRANSFERASE 23 297 - -
Lal22g0598 297 Pfam Bacterial transferase hexapeptide (six repeats) 215 248 IPR001451 -
Lal22g0598 297 Pfam Hexapeptide repeat of succinyl-transferase 182 198 IPR001451 -
Lal22g0598 297 MobiDBLite consensus disorder prediction 260 285 - -
Lal22g0598 297 TIGRFAM cysE: serine O-acetyltransferase 105 264 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lal22g0598 297 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 224 252 IPR018357 GO:0016740
Lal22g0598 297 SMART SATase_N_2_a 31 135 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lal22g0598 297 CDD LbH_SAT 162 262 IPR045304 -
Lal22g0598 297 Gene3D serine acetyltransferase, domain 1 13 164 IPR042122 -
Lal22g0598 297 Gene3D Hexapeptide repeat proteins 165 289 - -
Lal22g0598 297 SUPERFAMILY Trimeric LpxA-like enzymes 26 269 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0598 Lal-Chr22 4216953 4221021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0598 31 266 Miscellaneous Gene Families AT2G17640 57.203 2.76e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0598 K00640 - gmx:547632 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0663 6 4370868 4378716 Lal22g0598 22 4216953 4221021 LSH