Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0645 ATGGGCGAAATTGAGGGGTGGGCACAGCCACCAATTGGGCTATTGCCTAATGGCTTGTTGCCCAATGAAGCCGCCTCGGTGATAAAGGTGGTCAATTCGGAGCGGTGGATGAAGGCTGAAGAAAGGACTGCGGAGCTTATTGCCCACATTCAGCCTAGTCCACCCTCCGTAGAGCGCCGAAATGCAGTTGCAGACTATGTCCAGCGGCTGATCATGAAGTGCTTTCCTTGCCAGGTGTTCACCTTTGGGTCGGTACCCCTCAAAACATATTTGCCTGATGGAGATATTGACTTGACAGCATTTAGTAAAAATCAAAATGTGAAGGATAATTGGGCACATCAAGTTCGAGACATGCTAGAAAGCGAGGAGAAGAATGGGAATGCAGAGTTTCATGTCAAAGAAGTTCAGTACATCCAGGCTGAAGTGAAGATTATAAAGTGTCTTGTTGATAATATTGTAGTGGACATTTCATTTAACCAGCTTGGAGGATTGTGTACTCTTTGCTTTCTTGAGGAGGTTGATAATCTGATTAGCCAAGATCATTTATTCAAGCGTAGCATTATACTAATAAAAGCATGGTGTTACTATGAGAGCCGTTTACTCGGTGCCCACCATGGACTCATCTCAACTTATGCCTTAGAAACCTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTCACTGGGCCACTTGAGGTTTTGTATCGGTTTCTCGAGTTTTTTAGTAAGTTTGACTGGGATAACTTCTGTGTAAGCCTATGGGGCCCGGTTCCCATTAGTTCACTCCCAGATGTGACAGCTGAATCTCCTCGAAAAGATGGTGGAGAATTACTGCTCAGCAAGATATTTCTTGAAGCATGTAGTTCAGTTTATGCTGTTTTCCCTGGTGGTCAAGAAAATCAAGGACATCCCTTTGTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTGAACAATAACCTTGGCCGTAGTGTCAGCAAAGGTAATTTCTATAGGATACGCAGTGCCTTTGCTTTGGGGGCTAAAAGGCTGGCTAGATTACTCCATTGTCCTGAAGAGGAATCGGTTTTTGAAGTGAACCAGTTCTTTATGAACACATGGAAGAGACATGTTATCGGGCAACAGCCTGATGTTCCAAGCAATGATTTATCGTTATTGAGGCTATCAAGTCATGATGAAATACAAATGTCTCAGAATCTCCGGAACAATAAGCACAAAATTGACAGGGCTTCCAATCGAGAATTTCATGCTGAAGGCGGAAGAAGTCTATCTCAGCATAGTAATTTATCATCTGAAAACTCATTTAAAAGCAGTGATGTTTCTACAGTAATACATACTCAGAATCAAAAAAGTCATGGAAACCAACATAGTTCAAGGGCCTTTAATCGAGTCAGAAGGGAAACTAATTCTAATCATGGTGCTCATGTTGATAAAGGTCAGAGAAATGTTAAAGCTGATAACTCATTAAGTGATGTTCACGGAAGGTTTCTATTTGCCAGAACACGTTCTAGCCCTGACCTGACTGACTCATATGCTGAAGTTTCTTCCCAAGGAAGGCGTACAAGAGCACCTGAAAGTATTAGAGGACAGAATTCCTTTGCAAAGTCGGAGATTAGTCTTAGGAAGTATCTTGAACCTAGCAAGGCTACAAATTATAGTGTTAGAATTGAGGATTCATCTTCTAGTTACAACTCGTCTCATCAAGTTCTTGATAGTCCCACCAAATCAAACAGTGTTTCATATAGCTATCATGACGAATCAGGCATCGGGGCCATGGGTGAAGATATTGCATCTGTTACTAGCACGGTTGAAATGCAGATGATGCATCAGGAGGAGCAAGACCTTTTGAATATGATGGCATCTCCCACAGATCAAGGTTTCAGTGGTCATGCTCATATCCCGATAAATTATGCTGCAGGTCACCTTCCATTTCCACCGTCTATGCTTGCATCAATGGGGTATGCTCATAGAAATATGGGTAACATTCCCTTCATTGAAGCACCTTGGGGTGCAAATATGCACTTTCCTCCAGGTTTAGTCCCTTCACATTTTACTCCATATTTCCCTGGCATGGGATTGACCTCTAATCCTCAAGATATAATTGAAACCGGCAATGTGAATTTTAGTCCTGTGGAAATGAACTCGGAAGTTGATAATGATGTCTGCCATGAGCAAGAAAGGAGTTCTGCTAGCAGGGTTGAAGTTGATAATGGAGATTTTGAAATGCATGCAGATGATAAACAGCAGTCAACTTCAAATAGTTATAACTTTGCCCCACCATCTCGTGTGGGAAGCTCTACTAGTTCTGCCAGAATTCAGCAGAAGTTTAGTAAAGAAAACCAAGGATCATCAAGGGAAGAGAATATTGGTAATTTTCATTATCAAGATGGCCGAAGAAATGAGGTTTATTTCGATGATAGGATAGCAAATTCTCAGTTGCCCAGTCCATCACCTTCAAGCTCCCTCAGGAGTAAGACCTCTTCTGAAAGCTCTTGGGATGGATCATCAGCCAAATCCTCAAAATCAACAAGGGAAAAAAGAGGGAAGAAAAATGCTCCTTCAGCGCAATCTGCCCTTCACGGGAAGGGTAAGAATGTCTCAGAAATTTCGTCTAAGCGAGTAGATGATGAAAACAGAGTGCTGACTCCTGTGTCGGCTGTGGAATCTGATATTTCAGAAAGAAACACTAGGGCCCCAGCTGTTAGTTCAATGCTTGCTCCAAGGCATCAATTACCTGCTTATGAAGTTGCTCAGACAAGCGGATCAGATTCCCCGCTCCCTGTAGCTCCTATGATTTTAGGTCCTGGTTCTCGCCAAAGAGCGGTTGATAATTCTGGGGCTGCTCCATTTACATTCTATCCTACTGGGCCACCAGTACCCTTTGTTACAATGCTTCCTTTATATAATTTTCCTTCCGAGTCTTCTGACACATCAACGAGCAATTTCAGTTTAGAAGGAGGAGATAACAATGATTTTGGTCATAATGTTGATTCATATGAGGGATCTGTCCAGCCGGAGGTGTCAAGCCTGTCCAATTCTATGCCAAGGACCATTGTTGAGTTATCAGAGCACAAGTCTGACATCCTTAATAGTGACTTCGTTAGCCACTGGCATAACTTGCAATATGGGCGATTTTGTCAAAACACCTGTCATCCTCCTTCTATGGTCTATCCTTCACCTGTCACGGTGCCTCCTATTTACTTGCAGAGTCATTATCCTTGGGATGGTCCTGGAAGACCTGTTTCAGCTAACATGAACATTTTCAGTCAGCTTATGAGCTATGGGCCACGTCTACTTCCTGTTGCTGCACCTGTCCAGTCGGTTTCTAATAGACCTGCCACCAATATTTATCAGCGTTTTGCAGATGATATGCCGCGGTATCGAAGTGGGACTGGAACCTACCTGCCAAATCCTAAGGTTTCTGTTCGAGATCGACATTCCACAAATACAAGAAGGGGAAATTACAACTATGATAGAAGTGACCACCATGGTGATAGAGAAGGGAATTGGAATATGAACTCAAAGTTTCGAGCAACTGGACGTGGCCATAATCGCAACCATACTGAGAAGCCCAGTTCAAAGCCAGAGCGGTTGGAAACCAGTGAAAACTGTGTTGAGAAACCATGGGGTTCGCATAGGCATGACTCGGCTTCTTCTCACCAAAATGGCCCAGTTCGCCCAAATTCTTCGCAGAACAATTTGGCCAATGTAGCTTATGGAATGTACCCTGTACCAGGCATGAGCCCTAGTGGAGTCTCATCAAATGGACCAACAATGCCATCTGTTGTAATGTTCTATCCTTATGATCATAATGTGGGATACAGTACCCCAGCAGAACAGCTGGAGTTTGGGTCTTTAGGAGCCATGGGTTTCTCAGGTGTCAATGAACTATCACAACCGCATGAGGGAAGTCGATCTGGTGGAGTATTTGAAGAGCAAAGGTTTCATGGAGGCTCTGCTCATCTATCCTCACCAGATCAACCCTCTTCACCCCATGTCTCAAGGTAA 4014 0.4325 MGEIEGWAQPPIGLLPNGLLPNEAASVIKVVNSERWMKAEERTAELIAHIQPSPPSVERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNVKDNWAHQVRDMLESEEKNGNAEFHVKEVQYIQAEVKIIKCLVDNIVVDISFNQLGGLCTLCFLEEVDNLISQDHLFKRSIILIKAWCYYESRLLGAHHGLISTYALETLVLYIFHVFNNSFTGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAESPRKDGGELLLSKIFLEACSSVYAVFPGGQENQGHPFVSKHFNVIDPLRVNNNLGRSVSKGNFYRIRSAFALGAKRLARLLHCPEEESVFEVNQFFMNTWKRHVIGQQPDVPSNDLSLLRLSSHDEIQMSQNLRNNKHKIDRASNREFHAEGGRSLSQHSNLSSENSFKSSDVSTVIHTQNQKSHGNQHSSRAFNRVRRETNSNHGAHVDKGQRNVKADNSLSDVHGRFLFARTRSSPDLTDSYAEVSSQGRRTRAPESIRGQNSFAKSEISLRKYLEPSKATNYSVRIEDSSSSYNSSHQVLDSPTKSNSVSYSYHDESGIGAMGEDIASVTSTVEMQMMHQEEQDLLNMMASPTDQGFSGHAHIPINYAAGHLPFPPSMLASMGYAHRNMGNIPFIEAPWGANMHFPPGLVPSHFTPYFPGMGLTSNPQDIIETGNVNFSPVEMNSEVDNDVCHEQERSSASRVEVDNGDFEMHADDKQQSTSNSYNFAPPSRVGSSTSSARIQQKFSKENQGSSREENIGNFHYQDGRRNEVYFDDRIANSQLPSPSPSSSLRSKTSSESSWDGSSAKSSKSTREKRGKKNAPSAQSALHGKGKNVSEISSKRVDDENRVLTPVSAVESDISERNTRAPAVSSMLAPRHQLPAYEVAQTSGSDSPLPVAPMILGPGSRQRAVDNSGAAPFTFYPTGPPVPFVTMLPLYNFPSESSDTSTSNFSLEGGDNNDFGHNVDSYEGSVQPEVSSLSNSMPRTIVELSEHKSDILNSDFVSHWHNLQYGRFCQNTCHPPSMVYPSPVTVPPIYLQSHYPWDGPGRPVSANMNIFSQLMSYGPRLLPVAAPVQSVSNRPATNIYQRFADDMPRYRSGTGTYLPNPKVSVRDRHSTNTRRGNYNYDRSDHHGDREGNWNMNSKFRATGRGHNRNHTEKPSSKPERLETSENCVEKPWGSHRHDSASSHQNGPVRPNSSQNNLANVAYGMYPVPGMSPSGVSSNGPTMPSVVMFYPYDHNVGYSTPAEQLEFGSLGAMGFSGVNELSQPHEGSRSGGVFEEQRFHGGSAHLSSPDQPSSPHVSR 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0645 1337 MobiDBLite consensus disorder prediction 811 883 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 1184 1216 - -
Lal6g0645 1337 PANTHER - 1 1337 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 1146 1172 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 812 840 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 1217 1235 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 417 442 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 423 442 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 509 532 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 1322 1337 - -
Lal6g0645 1337 Gene3D - 162 360 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 746 798 - -
Lal6g0645 1337 SUPERFAMILY Nucleotidyltransferase 34 200 IPR043519 -
Lal6g0645 1337 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 1337 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 562 581 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 1129 1235 - -
Lal6g0645 1337 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 1300 1337 - -
Lal6g0645 1337 MobiDBLite consensus disorder prediction 749 792 - -
Lal6g0645 1337 CDD NT_PAP_TUTase 59 166 - -
Lal6g0645 1337 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0645 Lal-Chr6 4211358 4219009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0645 - - adu:107463396 1986.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0645 6 4211358 4219009 Lal6g0645 6 4211358 4219009 ECH
Lal6g0645 6 4211358 4219009 Lal22g0581 22 4029807 4037343 LSH
Lal6g0645 6 4211358 4219009 Lal18g1032 18 13304527 13312644 LSH
Lal5g0039 5 472226 479653 Lal6g0645 6 4211358 4219009 PCT
Lal6g0645 6 4211358 4219009 Lal5g0039 5 472226 479653 PCT