Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0039 ATGGAGGAGCATGATGAGATATTGTTAAATGGCTTGTTGCCCGATGAAGCTGCCACCACATCGGTGATGCGAGTGCTTGATACGGAGCAGTGGTTGAAGGCGGAAGAAAGGACTGCAGAGCTGATTGCCTGCATTCAGCCTAATCAACCCTCTGAGGAGCGCCGCAATGCAGTTGCTGATTATGTGCAACGGCTGATCGCAAGATGCTTCCCTTGCCAGGTATTCACGTTTGGCTCTGTACCCCTCAAGACTTATTTGCCTGATGGAGATATTGACTTAACAGCATTCAGTAAGGATCAAAGTATAAAGGATGCATGGGCTCATCAGGTTTGTGACATGCTCAAGAATGAGGAAAAGGATGAGAATGCTGAGTTTCGTGTCAGAGAGGTTCAGTACATCCAGGCTGAAGTTAAGATTATAAAGTGTCTCGTTGAGAATATTGTGGTAGACATTTCATTTAACCAGCTTGGAGGGTTGTGTACCCTTTGTTTTCTCGAGGAGATCGACAATCTGATTAACCAAAACCATTTATTCAAACGAAGCATTATGCTTATAAAAGCTTGGTGTTACTATGAGAGCCGTCTACTTGGTGCCCACCATGGACTTATCTCAACTTATGCATTAGAAACCTTGGTTCTGTATATATTTCATGTTTTCAACAATTCCTTCGCTGGACCACTTGAGGTATTGTATCGGTTTCTCGAGTTTTTTAGTAAGTTTGACTGGGAGAATTTTTGTGTCAGCCTGTGGGGTCCTGTGCCCATTAATTCACTCCCAGATGTGACAGGTAGTTACAATCTGATTGAAGATCTCTTTTTCTATAATGACATGCCTTCATCTTACTGTTTTCCTCCTTCAAAATTTTCCGTAGCTGATCCTCCTCGGAAAGATGGTGGTGATTTACTGCTCAGCAAGTTATTTCTTGATGCCTGTAGCTCAGTTTATGCTGTTTTCCCTGCTGGGCATGAAAATCAAGGGCAACCATTTGTTTCCAAGTATTTCAATGTTATTGATCCTCTGCGTGTCAACAATAACCTTGGGCGTAGCGTCGGCAAAGGAAATTTCCTTAGGATACGTAGTGCTTTTGCACTTGGCGCCAAACAGCTTGCCAGATTACTTGATTGCCCGAAGGAGGAATTGTTTTCAGAAATCAATCAGTTCTTTATGAACACTTGGAAAAGACATGGAAATGGGGAAAGGCCCGATGCTCCAAACGATGACTTGTGGCATTTGAGATTATCTAGTCATGACCAATTACCGGGATCGGAGAATTCCCGAGACAATAGCCAAAAAATTAATAATACCTCTATTTGTGAAATTCAAGTTGAAGGGGCACATTCTTTACAAAGCGGTCTATCTCACCATAGTAATTTATCCCCTGAAATATCTTGTAAGAGTAATGATGTTTCCACGGTATCACATGCTTTACAAAGTGGTCTATCTCACCAAAACAATGCAAGCCCTTCTGATCAGGTCGTAAGGGAAAGTACTTGTAACCAAGGTGCTAATGTTGATAAAGTTCAGAGAAATGTTAAGCTCGATAATCCATTTGGCGATGTTCCTCGTAACCAAGGTGCTAATGTTGATAAAGTTCAGAGAAATGTTAAGCTCGATAATCCATTTGGCGATGTTCCAGGAAGGTTTCTATTTGCAAGAACTCATTCTAGTCCTGAGCTGACTCGCTTATATGGTGAGGTTTTTTCTCGTGGAAGGCAGACAAGAGCCCCAGAAAGTGGGAAAAACTCAAATTCCTCTGCAATGGTGGAGAGTAATCATACGAATGTTGATTCAGACATGGCTGCAAGTAATGGTGTTAGAGTTGTCGATTCATCTGCTAAGCCTAACTTATCTCATCAAGTTATTGATATTTCCACAAATTCAAACAATAGTTCAAGTAGTTATCATGATGAATCTGTCCAAGGTATCATCGGTGAAAAGTTTGCATCTATTGCAGGAGCTGCTGGAACACATATGATGAATCAGGAGGAGCAGGATCTTTTGAACATGATGACATATGTCACAGCTCATGGTTTTACTGGTCAGCCTAATATTCCCGTGAATTTTGCTCTGGAACACCATCTACAACTTCCATTTTCACCTTCGATTCTTGCATCAATGGGATATGCTCAGAGAAATATTGGTAATCTTCACTTGGTTGAGGCTCCTTGGGGTAATAATATGCAACTTCCCCATGGTTTAGTCCCTTCACCATTGAGTCCATGTTTCCCTGGCATAGGATTGACCTCATATGCTGAAGACTTAATTGAAACTGGTAATGAGAATTTCAGTCCTGTTGAACCAAGTCTGGTGGAAGCGGATAATGATTTTTGGCATGAGCAAAGCAGACCTTCTTCTAGTGGGGTTGAAGTTGATGATGAAAATTTTCAAATGCTTCCTCATGATAAGCAAGAATCAACTTCAGGCATTTATAACTTTGCCCCACCATCTCATGTTGGCAGCTCTAGTAGTTCTTGCCGACATCAGCAGAAGTTTGCCGAAGATTACCAAGGTTCAATAAGAGAAGAGCGCATTGATACTTCACAATATCCAAATGGCAAAGGAAATGATGTTTATTTTGATGACAAAGTAGCAAATTCTAGGTTGACCAGTACACTACCTTCAAGTTGCCACGGGTGTAAGACATCTTCAGAAAGCTCTTGGGAAGTATCATCAGCAAAATCCTCAAAATCGACTAGGGAAAAAAGAGGGAGGACAAATACTCCTCCTGTGCCATCTTACGGAAAGGGTAAGAAGAATGTCTTGGAAATTTCATCTAATTCAGTGCATGATGAAAACAGACAGCAGACATATCCAAAAACTCTGACATTGGGTGTCCCAGAAAGAAGCACTCGGCTGCTTATGCATGTTCCGAGGCAGCAAGTATCTAGTTTTGAAGCAGCTCAGACAAGTGGATCAGATTCTGTGTTACCTATTGGTCCGATGCTTATAGGTCATGGTTCTCGCCAAAGAGCAATTGATAATAATTCAGGGGTTGGTCCCTTTGCATTCTGTCCTGCAGGGCCTCCAGTACCATTTCTTACAATGCTTCCATTGTATAATCTTCCACCCAAGGCTTCTTCTGCTACATCACCAAGCAATTTCAATGTGGAAGAAGTGGTGTATAATGCTGATTCTGGACAGAATTTTGATGTATCCGAGATTTATGACCACCACCCTGAAGTGTTGTTAAGCCCTGCTGAATCTATGAGGAGAGCCTCTTTTGACTCATCAGAGCCTAACCCTGACATTCTTAAAAGTGACTTCATTAGCCATTTGCAAAATTTGCAGTTTGGGCGATTTTGTCAAAATTCACGGCATCCTCAGCCAGTCATCCATCCTTCACATGTTATGGTGCCTCCTGTTTATTTGCAGGGTCGTTTTCCTTGGGATGGTCCTGGAAGACCAGTTTCAGTTAATATGAATATTTTCACTCAACTTATGAGCCATGGGCCACGTCTAGTGCATGTTGCTCCTCTCCATCCAGTTTCTAATAGACCTGCCAACGTTTCCCCACGGTTAGCAGATGAGATGCCACGGTATCGAAGTGGGACAGGAACCTACCTCCCAAATCCTGCTTCTGTTCGGGATCTGCATTCTACAAGTACTAGAAAGGGAAATTACAACTACGATAGAAGTGACAACCACGGTGACAGAGAAGGGAATTCAGATACGAACTCAAAGTTGCGAACAACTGGGCGTGGCCAAATTGACAAGTCTAGCTCAAGGCCAGAAAGGCTTGCCACAAGCGAGAGCCACACTGAAAGACCGTGGGGTTCACATACAAACGACTCCATTATTTCTCACCAGAATGAGAACAGTCCGGTCCACCTAAATTCCATGCAGGACCGGCCTGCGAATGTGGCTTACGGAATGTACTCTCTGCCAAGCATGAACTATGGTGGATTGTCATCAGATGGACCAACAATTCCATCGGTCGTAATGCTATATCCTTACGATCATAATGCTGACTACAGTTCACCAACAGAACAGCTTGAATTTGGATCTCTAGGATCACCAATGGGTTTCTCGGGTGTACACGAACTGAACGAGGGAAGTCATTCTGGTCGAGCTTTAAAGGAGCGAAGGTTTCATCATGGTGGTTCTTCTCAACAACCCTCACCAGATCAACCCTCTTCGCCCCATGTCCCAAGGTAG 4155 0.4289 MEEHDEILLNGLLPDEAATTSVMRVLDTEQWLKAEERTAELIACIQPNQPSEERRNAVADYVQRLIARCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKDQSIKDAWAHQVCDMLKNEEKDENAEFRVREVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEIDNLINQNHLFKRSIMLIKAWCYYESRLLGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWENFCVSLWGPVPINSLPDVTGSYNLIEDLFFYNDMPSSYCFPPSKFSVADPPRKDGGDLLLSKLFLDACSSVYAVFPAGHENQGQPFVSKYFNVIDPLRVNNNLGRSVGKGNFLRIRSAFALGAKQLARLLDCPKEELFSEINQFFMNTWKRHGNGERPDAPNDDLWHLRLSSHDQLPGSENSRDNSQKINNTSICEIQVEGAHSLQSGLSHHSNLSPEISCKSNDVSTVSHALQSGLSHQNNASPSDQVVRESTCNQGANVDKVQRNVKLDNPFGDVPRNQGANVDKVQRNVKLDNPFGDVPGRFLFARTHSSPELTRLYGEVFSRGRQTRAPESGKNSNSSAMVESNHTNVDSDMAASNGVRVVDSSAKPNLSHQVIDISTNSNNSSSSYHDESVQGIIGEKFASIAGAAGTHMMNQEEQDLLNMMTYVTAHGFTGQPNIPVNFALEHHLQLPFSPSILASMGYAQRNIGNLHLVEAPWGNNMQLPHGLVPSPLSPCFPGIGLTSYAEDLIETGNENFSPVEPSLVEADNDFWHEQSRPSSSGVEVDDENFQMLPHDKQESTSGIYNFAPPSHVGSSSSSCRHQQKFAEDYQGSIREERIDTSQYPNGKGNDVYFDDKVANSRLTSTLPSSCHGCKTSSESSWEVSSAKSSKSTREKRGRTNTPPVPSYGKGKKNVLEISSNSVHDENRQQTYPKTLTLGVPERSTRLLMHVPRQQVSSFEAAQTSGSDSVLPIGPMLIGHGSRQRAIDNNSGVGPFAFCPAGPPVPFLTMLPLYNLPPKASSATSPSNFNVEEVVYNADSGQNFDVSEIYDHHPEVLLSPAESMRRASFDSSEPNPDILKSDFISHLQNLQFGRFCQNSRHPQPVIHPSHVMVPPVYLQGRFPWDGPGRPVSVNMNIFTQLMSHGPRLVHVAPLHPVSNRPANVSPRLADEMPRYRSGTGTYLPNPASVRDLHSTSTRKGNYNYDRSDNHGDREGNSDTNSKLRTTGRGQIDKSSSRPERLATSESHTERPWGSHTNDSIISHQNENSPVHLNSMQDRPANVAYGMYSLPSMNYGGLSSDGPTIPSVVMLYPYDHNADYSSPTEQLEFGSLGSPMGFSGVHELNEGSHSGRALKERRFHHGGSSQQPSPDQPSSPHVPR 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0039 1384 MobiDBLite consensus disorder prediction 870 919 - -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 1186 1207 - -
Lal5g0039 1384 SUPERFAMILY Nucleotidyltransferase 21 195 IPR043519 -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 1352 1366 - -
Lal5g0039 1384 PANTHER - 290 515 - -
Lal5g0039 1384 PANTHER - 523 1383 - -
Lal5g0039 1384 PANTHER - 5 263 - -
Lal5g0039 1384 Gene3D - 157 384 - -
Lal5g0039 1384 Gene3D Beta Polymerase, domain 2 47 156 IPR043519 -
Lal5g0039 1384 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 290 515 - -
Lal5g0039 1384 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 5 263 - -
Lal5g0039 1384 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 523 1383 - -
Lal5g0039 1384 SUPERFAMILY PAP/OAS1 substrate-binding domain 177 375 - -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 870 893 - -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 1252 1270 - -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 1344 1384 - -
Lal5g0039 1384 CDD NT_PAP_TUTase 54 161 - -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 1162 1270 - -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 501 525 - -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 1208 1224 - -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 805 858 - -
Lal5g0039 1384 MobiDBLite consensus disorder prediction 805 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0039 Lal-Chr5 472226 479653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0039 - - lang:109329596 2313.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0039 5 472226 479653 Lal5g0039 5 472226 479653 ECH
Lal5g0039 5 472226 479653 Lal6g0645 6 4211358 4219009 PCT
Lal5g0039 5 472226 479653 Lal22g0581 22 4029807 4037343 PCT
Lal5g0039 5 472226 479653 Lal18g1032 18 13304527 13312644 PCT
Lal6g0645 6 4211358 4219009 Lal5g0039 5 472226 479653 PCT
Lal22g0581 22 4029807 4037343 Lal5g0039 5 472226 479653 PCT
Lal18g1032 18 13304527 13312644 Lal5g0039 5 472226 479653 PCT