Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0643 ATGAAGAACTTGCAGAACACAGAAGAATTACAGTCATCAACTCAAGCATCTAATGAGCCCAAGAGTGATCAACCAAACAATCACACAACTGACGCACCTGTGACAGACTCAGGTTCTGCATCTGCCTCAAGCAACGATAGCAAAAAAGTTTCACGGCAGGATATTGAGCTTGTCCAGAATTTAATCGAAAGGTGCCTACAATTATATATGAACAAGGATGAAGTGGTTAAAACACTATTGACTCGGGCAAAGATAGACCCTGGATTTACAACTTTAGTATGGCAGAAGTTGGAAGAAGAAAATGCTGATTTCTTTAGGGCCTACTATATCAGGCTAAAATTGAAAAAACAAATACTTCTATTCAATCATTTGCTTGAGCATCAGTATCATTTGATGAAGTGTCCCATGCCCGCAAAGGTTCCATTGGCTCCAATACAGAATGGAATCCATCCGATGCCCGTTAACAACCTACCTATGGGATACCCAGTGTTACAGCAGCAACCCATGCCAGCAGCAGGTCAACCTCATATTGACTCCATGGGTTGTGGTATATCAATGGGCCACGTGGTCAATGGAGTCCCTGCATCTAGCAATTTTCACCCCATTCGGATGAATTCTGGGAATGATATGATGATGGACCACGGTGCTCTGGATATGGCTCGTGTTATTCCACCAAATAGTGGAATGTCATCTGTGTCAGATATGCCAGTGAGTCCGACATCAGTAGCATCCAGTGGCCATTTCCCCTTCATTGCATCAGAAATATCAGGAATGGGGGCAGATACATCTGCTCTTGATACGGCATTTACATCAGATGTGGTAAGTTCAGTAGGACTACAACTTGCACCTGATGGCGGCAATGGAATTTCCAGATCCCTGGATCAAATTCAGTGGAATCTCAGCCTATCTGATCTAACAGCAGATTTGCCACACTTAGGAGATCTAGGAGCTCTGGGAAACTATCCCAGTTCACCATTTTTGCCATCTGATTCAGACATTTTACTCGAATCTCCAGATCAACAGGATATAGTGGATGACTTCTTTGTGAATTCAGAGCCCCCATGCTCCCAATCAGATGAGGAGAAATCTTAA 1092 0.4341 MKNLQNTEELQSSTQASNEPKSDQPNNHTTDAPVTDSGSASASSNDSKKVSRQDIELVQNLIERCLQLYMNKDEVVKTLLTRAKIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKCPMPAKVPLAPIQNGIHPMPVNNLPMGYPVLQQQPMPAAGQPHIDSMGCGISMGHVVNGVPASSNFHPIRMNSGNDMMMDHGALDMARVIPPNSGMSSVSDMPVSPTSVASSGHFPFIASEISGMGADTSALDTAFTSDVVSSVGLQLAPDGGNGISRSLDQIQWNLSLSDLTADLPHLGDLGALGNYPSSPFLPSDSDILLESPDQQDIVDDFFVNSEPPCSQSDEEKS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0643 363 MobiDBLite consensus disorder prediction 1 48 - -
Lal6g0643 363 Pfam Plant protein 1589 of unknown function (A_thal_3526) 58 109 IPR006476 -
Lal6g0643 363 PANTHER HELICASE WITH ZINC FINGER PROTEIN 1 363 - -
Lal6g0643 363 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 55 111 IPR006476 -
Lal6g0643 363 MobiDBLite consensus disorder prediction 1 49 - -
Lal6g0643 363 PANTHER OS02G0137100 PROTEIN 1 363 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0643 Lal-Chr6 4195062 4201084 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0643 - - gmx:100809202 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0643 6 4195062 4201084 Lal6g0643 6 4195062 4201084 ECH
Lal6g0643 6 4195062 4201084 Lal22g0580 22 4000457 4022578 LSH
Lal6g0643 6 4195062 4201084 Lal18g1034 18 13333931 13339479 LSH